Protein–RNA interactions for Protein: Q9HBH1

PDF, Peptide deformylase, mitochondrial, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDFQ9HBH1 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDFQ9HBH1 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDFQ9HBH1 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.22■□□□□ 0.03
PDFQ9HBH1 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.22■□□□□ 0.03
PDFQ9HBH1 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDFQ9HBH1 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDFQ9HBH1 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.22■□□□□ 0.03
PDFQ9HBH1 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
PDFQ9HBH1 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PDFQ9HBH1 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDFQ9HBH1 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.22■□□□□ 0.03
PDFQ9HBH1 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
PDFQ9HBH1 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PDFQ9HBH1 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.22■□□□□ 0.03
PDFQ9HBH1 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.22■□□□□ 0.03
PDFQ9HBH1 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.22■□□□□ 0.03
PDFQ9HBH1 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PDFQ9HBH1 BNIP3P42-201ENST00000454982 569 ntBASIC15.22■□□□□ 0.03
PDFQ9HBH1 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.22■□□□□ 0.03
PDFQ9HBH1 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.22■□□□□ 0.03
PDFQ9HBH1 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PDFQ9HBH1 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.22■□□□□ 0.03
PDFQ9HBH1 GCOM2-201ENST00000509133 1104 ntBASIC15.22■□□□□ 0.03
PDFQ9HBH1 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.22■□□□□ 0.03
PDFQ9HBH1 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PDFQ9HBH1 AC023310.1-201ENST00000554836 735 ntBASIC15.22■□□□□ 0.03
PDFQ9HBH1 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.22■□□□□ 0.03
PDFQ9HBH1 BNIP3P29-201ENST00000598302 571 ntBASIC15.22■□□□□ 0.03
PDFQ9HBH1 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.22■□□□□ 0.03
PDFQ9HBH1 AC011447.5-201ENST00000616168 564 ntBASIC15.22■□□□□ 0.03
PDFQ9HBH1 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDFQ9HBH1 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDFQ9HBH1 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.22■□□□□ 0.03
PDFQ9HBH1 AC023824.1-201ENST00000562945 2975 ntBASIC15.22■□□□□ 0.03
PDFQ9HBH1 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDFQ9HBH1 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
PDFQ9HBH1 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDFQ9HBH1 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDFQ9HBH1 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDFQ9HBH1 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDFQ9HBH1 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PDFQ9HBH1 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDFQ9HBH1 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PDFQ9HBH1 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDFQ9HBH1 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDFQ9HBH1 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDFQ9HBH1 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PDFQ9HBH1 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDFQ9HBH1 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDFQ9HBH1 AL596257.1-201ENST00000641463 2694 ntBASIC15.21■□□□□ 0.03
PDFQ9HBH1 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.21■□□□□ 0.03
PDFQ9HBH1 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.21■□□□□ 0.03
PDFQ9HBH1 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.21■□□□□ 0.03
PDFQ9HBH1 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDFQ9HBH1 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
PDFQ9HBH1 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDFQ9HBH1 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDFQ9HBH1 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDFQ9HBH1 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDFQ9HBH1 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
PDFQ9HBH1 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDFQ9HBH1 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDFQ9HBH1 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
PDFQ9HBH1 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDFQ9HBH1 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.21■□□□□ 0.03
PDFQ9HBH1 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDFQ9HBH1 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PDFQ9HBH1 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
PDFQ9HBH1 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.21■□□□□ 0.03
PDFQ9HBH1 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PDFQ9HBH1 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.21■□□□□ 0.03
PDFQ9HBH1 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PDFQ9HBH1 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.21■□□□□ 0.03
PDFQ9HBH1 DUX4L45-201ENST00000566406 1057 ntBASIC15.21■□□□□ 0.03
PDFQ9HBH1 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.21■□□□□ 0.03
PDFQ9HBH1 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.21■□□□□ 0.03
PDFQ9HBH1 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.21■□□□□ 0.03
PDFQ9HBH1 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.21■□□□□ 0.03
PDFQ9HBH1 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDFQ9HBH1 AC007292.2-201ENST00000593524 1812 ntBASIC15.21■□□□□ 0.03
PDFQ9HBH1 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.21■□□□□ 0.03
PDFQ9HBH1 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PDFQ9HBH1 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
PDFQ9HBH1 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDFQ9HBH1 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.21■□□□□ 0.03
PDFQ9HBH1 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PDFQ9HBH1 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDFQ9HBH1 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PDFQ9HBH1 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.21■□□□□ 0.03
PDFQ9HBH1 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
PDFQ9HBH1 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
PDFQ9HBH1 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDFQ9HBH1 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDFQ9HBH1 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PDFQ9HBH1 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
PDFQ9HBH1 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
PDFQ9HBH1 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.02
PDFQ9HBH1 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PDFQ9HBH1 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.2■□□□□ 0.02
PDFQ9HBH1 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms