Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
HIPK3Q9H422 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIPK3Q9H422 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.45■□□□□ 0.22
HIPK3Q9H422 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
HIPK3Q9H422 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HIPK3Q9H422 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIPK3Q9H422 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
HIPK3Q9H422 AL627231.1-201ENST00000394467 1125 ntBASIC16.45■□□□□ 0.22
HIPK3Q9H422 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HIPK3Q9H422 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIPK3Q9H422 AC078991.1-201ENST00000437297 610 ntBASIC16.45■□□□□ 0.22
HIPK3Q9H422 KLF2P1-201ENST00000447438 1042 ntBASIC16.45■□□□□ 0.22
HIPK3Q9H422 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC16.45■□□□□ 0.22
HIPK3Q9H422 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HIPK3Q9H422 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC16.45■□□□□ 0.22
HIPK3Q9H422 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC16.45■□□□□ 0.22
HIPK3Q9H422 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
HIPK3Q9H422 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.45■□□□□ 0.22
HIPK3Q9H422 PAM16-211ENST00000575848 518 ntTSL 3 BASIC16.45■□□□□ 0.22
HIPK3Q9H422 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
HIPK3Q9H422 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
HIPK3Q9H422 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
HIPK3Q9H422 AC087045.2-201ENST00000606279 1003 ntBASIC16.45■□□□□ 0.22
HIPK3Q9H422 AC092171.5-201ENST00000608012 942 ntBASIC16.45■□□□□ 0.22
HIPK3Q9H422 AC051619.9-201ENST00000623237 597 ntBASIC16.45■□□□□ 0.22
HIPK3Q9H422 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIPK3Q9H422 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HIPK3Q9H422 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIPK3Q9H422 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIPK3Q9H422 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIPK3Q9H422 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.45■□□□□ 0.22
HIPK3Q9H422 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.45■□□□□ 0.22
HIPK3Q9H422 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIPK3Q9H422 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.45■□□□□ 0.22
HIPK3Q9H422 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIPK3Q9H422 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
HIPK3Q9H422 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.45■□□□□ 0.22
HIPK3Q9H422 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.45■□□□□ 0.22
HIPK3Q9H422 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HIPK3Q9H422 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIPK3Q9H422 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HIPK3Q9H422 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIPK3Q9H422 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HIPK3Q9H422 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
HIPK3Q9H422 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.45■□□□□ 0.22
HIPK3Q9H422 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
HIPK3Q9H422 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC16.45■□□□□ 0.22
HIPK3Q9H422 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC16.45■□□□□ 0.22
HIPK3Q9H422 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIPK3Q9H422 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIPK3Q9H422 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
HIPK3Q9H422 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
HIPK3Q9H422 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.44■□□□□ 0.22
HIPK3Q9H422 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.44■□□□□ 0.22
HIPK3Q9H422 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIPK3Q9H422 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIPK3Q9H422 AC244394.1-201ENST00000435000 1665 ntBASIC16.44■□□□□ 0.22
HIPK3Q9H422 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HIPK3Q9H422 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.44■□□□□ 0.22
HIPK3Q9H422 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
HIPK3Q9H422 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIPK3Q9H422 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
HIPK3Q9H422 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
HIPK3Q9H422 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIPK3Q9H422 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIPK3Q9H422 AC239868.1-201ENST00000369385 493 ntBASIC16.44■□□□□ 0.22
HIPK3Q9H422 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIPK3Q9H422 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.44■□□□□ 0.22
HIPK3Q9H422 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC16.44■□□□□ 0.22
HIPK3Q9H422 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC16.44■□□□□ 0.22
HIPK3Q9H422 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC16.44■□□□□ 0.22
HIPK3Q9H422 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC16.44■□□□□ 0.22
HIPK3Q9H422 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC16.44■□□□□ 0.22
HIPK3Q9H422 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC16.44■□□□□ 0.22
HIPK3Q9H422 AC103810.10-201ENST00000606504 343 ntBASIC16.44■□□□□ 0.22
HIPK3Q9H422 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC16.44■□□□□ 0.22
HIPK3Q9H422 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.44■□□□□ 0.22
HIPK3Q9H422 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HIPK3Q9H422 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HIPK3Q9H422 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HIPK3Q9H422 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HIPK3Q9H422 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.44■□□□□ 0.22
HIPK3Q9H422 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIPK3Q9H422 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
HIPK3Q9H422 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.44■□□□□ 0.22
HIPK3Q9H422 AL137783.1-201ENST00000623494 1896 ntBASIC16.44■□□□□ 0.22
HIPK3Q9H422 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIPK3Q9H422 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HIPK3Q9H422 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
HIPK3Q9H422 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.43■□□□□ 0.22
HIPK3Q9H422 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIPK3Q9H422 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIPK3Q9H422 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIPK3Q9H422 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HIPK3Q9H422 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
HIPK3Q9H422 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIPK3Q9H422 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIPK3Q9H422 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HIPK3Q9H422 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.43■□□□□ 0.22
HIPK3Q9H422 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms