Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.71■□□□□ 0.1
FOXP3Q9BZS1 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXP3Q9BZS1 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
FOXP3Q9BZS1 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXP3Q9BZS1 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.7■□□□□ 0.1
FOXP3Q9BZS1 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
FOXP3Q9BZS1 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXP3Q9BZS1 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXP3Q9BZS1 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXP3Q9BZS1 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
FOXP3Q9BZS1 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXP3Q9BZS1 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
FOXP3Q9BZS1 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXP3Q9BZS1 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXP3Q9BZS1 AC007274.1-201ENST00000439805 662 ntBASIC15.7■□□□□ 0.1
FOXP3Q9BZS1 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.7■□□□□ 0.1
FOXP3Q9BZS1 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.7■□□□□ 0.1
FOXP3Q9BZS1 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.7■□□□□ 0.1
FOXP3Q9BZS1 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXP3Q9BZS1 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXP3Q9BZS1 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.7■□□□□ 0.1
FOXP3Q9BZS1 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.7■□□□□ 0.1
FOXP3Q9BZS1 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXP3Q9BZS1 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXP3Q9BZS1 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.7■□□□□ 0.1
FOXP3Q9BZS1 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXP3Q9BZS1 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXP3Q9BZS1 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
FOXP3Q9BZS1 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXP3Q9BZS1 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXP3Q9BZS1 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.7■□□□□ 0.1
FOXP3Q9BZS1 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXP3Q9BZS1 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXP3Q9BZS1 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.7■□□□□ 0.1
FOXP3Q9BZS1 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
FOXP3Q9BZS1 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXP3Q9BZS1 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
FOXP3Q9BZS1 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXP3Q9BZS1 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.7■□□□□ 0.1
FOXP3Q9BZS1 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXP3Q9BZS1 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
FOXP3Q9BZS1 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
FOXP3Q9BZS1 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXP3Q9BZS1 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXP3Q9BZS1 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
FOXP3Q9BZS1 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
FOXP3Q9BZS1 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.69■□□□□ 0.1
FOXP3Q9BZS1 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
FOXP3Q9BZS1 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXP3Q9BZS1 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.69■□□□□ 0.1
FOXP3Q9BZS1 AC006504.5-208ENST00000588784 2401 ntBASIC15.69■□□□□ 0.1
FOXP3Q9BZS1 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXP3Q9BZS1 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXP3Q9BZS1 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXP3Q9BZS1 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXP3Q9BZS1 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXP3Q9BZS1 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
FOXP3Q9BZS1 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.69■□□□□ 0.1
FOXP3Q9BZS1 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.69■□□□□ 0.1
FOXP3Q9BZS1 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.69■□□□□ 0.1
FOXP3Q9BZS1 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXP3Q9BZS1 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
FOXP3Q9BZS1 AC027601.5-201ENST00000624065 2482 ntBASIC15.69■□□□□ 0.1
FOXP3Q9BZS1 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXP3Q9BZS1 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
FOXP3Q9BZS1 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
FOXP3Q9BZS1 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
FOXP3Q9BZS1 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXP3Q9BZS1 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
FOXP3Q9BZS1 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXP3Q9BZS1 RN7SL618P-201ENST00000477850 296 ntBASIC15.69■□□□□ 0.1
FOXP3Q9BZS1 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.69■□□□□ 0.1
FOXP3Q9BZS1 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.69■□□□□ 0.1
FOXP3Q9BZS1 API5-211ENST00000534695 560 ntTSL 5 BASIC15.69■□□□□ 0.1
FOXP3Q9BZS1 TP53TG3HP-202ENST00000569755 579 ntBASIC15.69■□□□□ 0.1
FOXP3Q9BZS1 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.69■□□□□ 0.1
FOXP3Q9BZS1 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.69■□□□□ 0.1
FOXP3Q9BZS1 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
FOXP3Q9BZS1 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.69■□□□□ 0.1
FOXP3Q9BZS1 LILRP1-201ENST00000444199 1370 ntBASIC15.69■□□□□ 0.1
FOXP3Q9BZS1 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
FOXP3Q9BZS1 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.69■□□□□ 0.1
FOXP3Q9BZS1 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
FOXP3Q9BZS1 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXP3Q9BZS1 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
FOXP3Q9BZS1 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
FOXP3Q9BZS1 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.69■□□□□ 0.1
FOXP3Q9BZS1 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.69■□□□□ 0.1
FOXP3Q9BZS1 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.69■□□□□ 0.1
FOXP3Q9BZS1 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXP3Q9BZS1 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXP3Q9BZS1 CU639417.3-201ENST00000624240 1404 ntBASIC15.68■□□□□ 0.1
FOXP3Q9BZS1 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXP3Q9BZS1 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
FOXP3Q9BZS1 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXP3Q9BZS1 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.68■□□□□ 0.1
FOXP3Q9BZS1 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXP3Q9BZS1 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXP3Q9BZS1 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXP3Q9BZS1 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms