Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 LSM5-207ENST00000410044 687 ntTSL 3 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 FNTAP2-201ENST00000430308 634 ntBASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 FAM8A4P-201ENST00000435433 1213 ntBASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 MTX1P1-201ENST00000440904 838 ntBASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 Z93015.1-201ENST00000451718 390 ntBASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 RNMTL1P1-201ENST00000454103 560 ntBASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 AC100850.1-201ENST00000506768 649 ntBASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 AC044849.1-201ENST00000519737 1188 ntBASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 AGER-214ENST00000538695 487 ntTSL 2 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 AC106820.3-201ENST00000561653 397 ntBASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 DUX4L45-201ENST00000566406 1057 ntBASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 DERL2-202ENST00000570848 657 ntTSL 5 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 INO80C-210ENST00000590757 595 ntTSL 2 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 AL008638.5-201ENST00000623814 1298 ntBASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 AC092384.3-202ENST00000564646 2873 ntBASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
KRTAP4-3Q9BYR4 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
KRTAP4-3Q9BYR4 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC5.13□□□□□ -1.59
KRTAP4-3Q9BYR4 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC5.13□□□□□ -1.59
KRTAP4-3Q9BYR4 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
KRTAP4-3Q9BYR4 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
KRTAP4-3Q9BYR4 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC5.13□□□□□ -1.59
KRTAP4-3Q9BYR4 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
KRTAP4-3Q9BYR4 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
KRTAP4-3Q9BYR4 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
KRTAP4-3Q9BYR4 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC5.13□□□□□ -1.59
KRTAP4-3Q9BYR4 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
KRTAP4-3Q9BYR4 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
KRTAP4-3Q9BYR4 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms