Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.51□□□□□ -0.25
VRK1Q99986 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
VRK1Q99986 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VRK1Q99986 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
VRK1Q99986 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.51□□□□□ -0.25
VRK1Q99986 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
VRK1Q99986 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.51□□□□□ -0.25
VRK1Q99986 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VRK1Q99986 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.51□□□□□ -0.25
VRK1Q99986 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.51□□□□□ -0.25
VRK1Q99986 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.51□□□□□ -0.25
VRK1Q99986 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.51□□□□□ -0.25
VRK1Q99986 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VRK1Q99986 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.51□□□□□ -0.25
VRK1Q99986 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
VRK1Q99986 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
VRK1Q99986 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.51□□□□□ -0.25
VRK1Q99986 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.51□□□□□ -0.25
VRK1Q99986 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
VRK1Q99986 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
VRK1Q99986 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.51□□□□□ -0.25
VRK1Q99986 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.51□□□□□ -0.25
VRK1Q99986 AC092337.1-201ENST00000568699 1129 ntBASIC13.51□□□□□ -0.25
VRK1Q99986 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.51□□□□□ -0.25
VRK1Q99986 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.51□□□□□ -0.25
VRK1Q99986 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.51□□□□□ -0.25
VRK1Q99986 LINC01115-203ENST00000606068 577 ntBASIC13.51□□□□□ -0.25
VRK1Q99986 AC093726.1-201ENST00000608064 963 ntBASIC13.51□□□□□ -0.25
VRK1Q99986 AC079781.5-202ENST00000641784 3743 ntBASIC13.51□□□□□ -0.25
VRK1Q99986 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
VRK1Q99986 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
VRK1Q99986 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VRK1Q99986 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.51□□□□□ -0.25
VRK1Q99986 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.51□□□□□ -0.25
VRK1Q99986 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VRK1Q99986 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VRK1Q99986 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VRK1Q99986 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.51□□□□□ -0.25
VRK1Q99986 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
VRK1Q99986 AC013726.1-201ENST00000563747 2285 ntBASIC13.51□□□□□ -0.25
VRK1Q99986 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
VRK1Q99986 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VRK1Q99986 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VRK1Q99986 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VRK1Q99986 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.51□□□□□ -0.25
VRK1Q99986 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VRK1Q99986 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VRK1Q99986 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
VRK1Q99986 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
VRK1Q99986 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
VRK1Q99986 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.5□□□□□ -0.25
VRK1Q99986 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
VRK1Q99986 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.5□□□□□ -0.25
VRK1Q99986 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VRK1Q99986 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VRK1Q99986 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VRK1Q99986 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VRK1Q99986 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.5□□□□□ -0.25
VRK1Q99986 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VRK1Q99986 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VRK1Q99986 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.5□□□□□ -0.25
VRK1Q99986 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VRK1Q99986 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VRK1Q99986 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
VRK1Q99986 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VRK1Q99986 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.5□□□□□ -0.25
VRK1Q99986 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VRK1Q99986 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VRK1Q99986 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
VRK1Q99986 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
VRK1Q99986 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VRK1Q99986 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.5□□□□□ -0.25
VRK1Q99986 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13.5□□□□□ -0.25
VRK1Q99986 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.5□□□□□ -0.25
VRK1Q99986 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.5□□□□□ -0.25
VRK1Q99986 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
VRK1Q99986 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.5□□□□□ -0.25
VRK1Q99986 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.5□□□□□ -0.25
VRK1Q99986 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
VRK1Q99986 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.5□□□□□ -0.25
VRK1Q99986 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.5□□□□□ -0.25
VRK1Q99986 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.5□□□□□ -0.25
VRK1Q99986 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VRK1Q99986 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
VRK1Q99986 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VRK1Q99986 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
VRK1Q99986 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VRK1Q99986 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VRK1Q99986 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.5□□□□□ -0.25
VRK1Q99986 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VRK1Q99986 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
VRK1Q99986 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.5□□□□□ -0.25
VRK1Q99986 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VRK1Q99986 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VRK1Q99986 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VRK1Q99986 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.5□□□□□ -0.25
VRK1Q99986 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
VRK1Q99986 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
VRK1Q99986 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.5□□□□□ -0.25
VRK1Q99986 Z97205.2-201ENST00000564697 1639 ntBASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms