Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
EYA3Q99504 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
EYA3Q99504 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
EYA3Q99504 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
EYA3Q99504 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC18.24■□□□□ 0.51
EYA3Q99504 AC069218.1-201ENST00000435269 762 ntBASIC18.24■□□□□ 0.51
EYA3Q99504 AC019193.1-201ENST00000506678 823 ntBASIC18.24■□□□□ 0.51
EYA3Q99504 IGLV3-15-201ENST00000518356 244 ntBASIC18.24■□□□□ 0.51
EYA3Q99504 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC18.24■□□□□ 0.51
EYA3Q99504 AC242376.1-201ENST00000559033 726 ntBASIC18.24■□□□□ 0.51
EYA3Q99504 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC18.24■□□□□ 0.51
EYA3Q99504 PAM16-211ENST00000575848 518 ntTSL 3 BASIC18.24■□□□□ 0.51
EYA3Q99504 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
EYA3Q99504 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC18.24■□□□□ 0.51
EYA3Q99504 RPL35-206ENST00000629845 340 ntTSL 5 BASIC18.24■□□□□ 0.51
EYA3Q99504 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
EYA3Q99504 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
EYA3Q99504 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
EYA3Q99504 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
EYA3Q99504 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
EYA3Q99504 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
EYA3Q99504 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
EYA3Q99504 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
EYA3Q99504 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
EYA3Q99504 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
EYA3Q99504 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.24■□□□□ 0.51
EYA3Q99504 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
EYA3Q99504 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC18.24■□□□□ 0.51
EYA3Q99504 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC18.23■□□□□ 0.51
EYA3Q99504 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
EYA3Q99504 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
EYA3Q99504 AMT-204ENST00000427987 1646 ntTSL 5 BASIC18.23■□□□□ 0.51
EYA3Q99504 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
EYA3Q99504 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
EYA3Q99504 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18.23■□□□□ 0.51
EYA3Q99504 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.23■□□□□ 0.51
EYA3Q99504 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
EYA3Q99504 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
EYA3Q99504 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
EYA3Q99504 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
EYA3Q99504 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.23■□□□□ 0.51
EYA3Q99504 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.23■□□□□ 0.51
EYA3Q99504 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
EYA3Q99504 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
EYA3Q99504 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
EYA3Q99504 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
EYA3Q99504 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
EYA3Q99504 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
EYA3Q99504 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
EYA3Q99504 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
EYA3Q99504 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
EYA3Q99504 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
EYA3Q99504 KLF2P1-201ENST00000447438 1042 ntBASIC18.23■□□□□ 0.51
EYA3Q99504 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC18.23■□□□□ 0.51
EYA3Q99504 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC18.23■□□□□ 0.51
EYA3Q99504 LY6E-208ENST00000520531 490 ntTSL 2 BASIC18.23■□□□□ 0.51
EYA3Q99504 CCNC-217ENST00000523985 958 ntTSL 2 BASIC18.23■□□□□ 0.51
EYA3Q99504 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
EYA3Q99504 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
EYA3Q99504 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC18.23■□□□□ 0.51
EYA3Q99504 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC18.23■□□□□ 0.51
EYA3Q99504 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
EYA3Q99504 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
EYA3Q99504 AC008894.3-201ENST00000624324 3103 ntBASIC18.23■□□□□ 0.51
EYA3Q99504 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
EYA3Q99504 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
EYA3Q99504 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
EYA3Q99504 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.23■□□□□ 0.51
EYA3Q99504 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
EYA3Q99504 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
EYA3Q99504 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC18.23■□□□□ 0.51
EYA3Q99504 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
EYA3Q99504 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
EYA3Q99504 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
EYA3Q99504 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
EYA3Q99504 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.23■□□□□ 0.51
EYA3Q99504 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
EYA3Q99504 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
EYA3Q99504 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC18.23■□□□□ 0.51
EYA3Q99504 AC092978.1-202ENST00000637590 1327 ntBASIC18.23■□□□□ 0.51
EYA3Q99504 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
EYA3Q99504 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
EYA3Q99504 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.22■□□□□ 0.51
EYA3Q99504 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
EYA3Q99504 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
EYA3Q99504 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.22■□□□□ 0.51
EYA3Q99504 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC18.22■□□□□ 0.51
EYA3Q99504 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
EYA3Q99504 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC18.22■□□□□ 0.51
EYA3Q99504 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
EYA3Q99504 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
EYA3Q99504 FAM90A7P-201ENST00000382628 1395 ntBASIC18.22■□□□□ 0.51
EYA3Q99504 FAM90A23P-201ENST00000400136 1395 ntBASIC18.22■□□□□ 0.51
EYA3Q99504 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
EYA3Q99504 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
EYA3Q99504 MBLAC2-202ENST00000514906 1936 ntBASIC18.22■□□□□ 0.51
EYA3Q99504 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
EYA3Q99504 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
EYA3Q99504 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
EYA3Q99504 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms