Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PTCD2Q8WV60 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.49■□□□□ 0.07
PTCD2Q8WV60 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PTCD2Q8WV60 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PTCD2Q8WV60 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.49■□□□□ 0.07
PTCD2Q8WV60 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PTCD2Q8WV60 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PTCD2Q8WV60 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.49■□□□□ 0.07
PTCD2Q8WV60 RN7SL837P-201ENST00000463010 287 ntBASIC15.49■□□□□ 0.07
PTCD2Q8WV60 RN7SL752P-201ENST00000463779 287 ntBASIC15.49■□□□□ 0.07
PTCD2Q8WV60 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.49■□□□□ 0.07
PTCD2Q8WV60 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC15.49■□□□□ 0.07
PTCD2Q8WV60 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC15.49■□□□□ 0.07
PTCD2Q8WV60 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.49■□□□□ 0.07
PTCD2Q8WV60 AC092552.1-201ENST00000547243 906 ntBASIC15.49■□□□□ 0.07
PTCD2Q8WV60 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.49■□□□□ 0.07
PTCD2Q8WV60 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.49■□□□□ 0.07
PTCD2Q8WV60 SAMD11P1-201ENST00000571429 661 ntBASIC15.49■□□□□ 0.07
PTCD2Q8WV60 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.49■□□□□ 0.07
PTCD2Q8WV60 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
PTCD2Q8WV60 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.49■□□□□ 0.07
PTCD2Q8WV60 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PTCD2Q8WV60 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.49■□□□□ 0.07
PTCD2Q8WV60 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
PTCD2Q8WV60 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.49■□□□□ 0.07
PTCD2Q8WV60 RPSAP52-203ENST00000622976 1023 ntBASIC15.49■□□□□ 0.07
PTCD2Q8WV60 AC090506.2-201ENST00000624521 419 ntBASIC15.49■□□□□ 0.07
PTCD2Q8WV60 SUGT1P3-205ENST00000633814 572 ntTSL 3 BASIC15.49■□□□□ 0.07
PTCD2Q8WV60 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
PTCD2Q8WV60 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
PTCD2Q8WV60 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
PTCD2Q8WV60 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.49■□□□□ 0.07
PTCD2Q8WV60 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.49■□□□□ 0.07
PTCD2Q8WV60 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PTCD2Q8WV60 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PTCD2Q8WV60 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
PTCD2Q8WV60 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.49■□□□□ 0.07
PTCD2Q8WV60 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
PTCD2Q8WV60 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
PTCD2Q8WV60 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.49■□□□□ 0.07
PTCD2Q8WV60 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PTCD2Q8WV60 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PTCD2Q8WV60 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
PTCD2Q8WV60 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
PTCD2Q8WV60 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PTCD2Q8WV60 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PTCD2Q8WV60 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
PTCD2Q8WV60 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PTCD2Q8WV60 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.48■□□□□ 0.07
PTCD2Q8WV60 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PTCD2Q8WV60 AL390755.1-201ENST00000623716 2027 ntBASIC15.48■□□□□ 0.07
PTCD2Q8WV60 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
PTCD2Q8WV60 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PTCD2Q8WV60 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.48■□□□□ 0.07
PTCD2Q8WV60 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PTCD2Q8WV60 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.48■□□□□ 0.07
PTCD2Q8WV60 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PTCD2Q8WV60 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
PTCD2Q8WV60 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
PTCD2Q8WV60 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
PTCD2Q8WV60 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.48■□□□□ 0.07
PTCD2Q8WV60 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.48■□□□□ 0.07
PTCD2Q8WV60 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.48■□□□□ 0.07
PTCD2Q8WV60 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PTCD2Q8WV60 TMEM14DP-201ENST00000422205 345 ntBASIC15.48■□□□□ 0.07
PTCD2Q8WV60 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.48■□□□□ 0.07
PTCD2Q8WV60 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.48■□□□□ 0.07
PTCD2Q8WV60 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.48■□□□□ 0.07
PTCD2Q8WV60 FAM86LP-201ENST00000478302 853 ntBASIC15.48■□□□□ 0.07
PTCD2Q8WV60 AC004066.1-201ENST00000502488 802 ntBASIC15.48■□□□□ 0.07
PTCD2Q8WV60 GAPDHP40-201ENST00000505218 1006 ntBASIC15.48■□□□□ 0.07
PTCD2Q8WV60 CR383656.12-201ENST00000549567 513 ntBASIC15.48■□□□□ 0.07
PTCD2Q8WV60 MEG8-217ENST00000556637 924 ntTSL 5 BASIC15.48■□□□□ 0.07
PTCD2Q8WV60 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
PTCD2Q8WV60 RRP7BP-205ENST00000566851 833 ntBASIC15.48■□□□□ 0.07
PTCD2Q8WV60 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.48■□□□□ 0.07
PTCD2Q8WV60 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
PTCD2Q8WV60 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
PTCD2Q8WV60 TMEM261P1-201ENST00000604899 340 ntBASIC15.48■□□□□ 0.07
PTCD2Q8WV60 MKKS-203ENST00000609375 882 ntTSL 2 BASIC15.48■□□□□ 0.07
PTCD2Q8WV60 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PTCD2Q8WV60 AC020910.4-201ENST00000612269 540 ntBASIC15.48■□□□□ 0.07
PTCD2Q8WV60 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.48■□□□□ 0.07
PTCD2Q8WV60 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PTCD2Q8WV60 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PTCD2Q8WV60 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PTCD2Q8WV60 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PTCD2Q8WV60 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PTCD2Q8WV60 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
PTCD2Q8WV60 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PTCD2Q8WV60 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
PTCD2Q8WV60 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PTCD2Q8WV60 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PTCD2Q8WV60 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PTCD2Q8WV60 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PTCD2Q8WV60 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.47■□□□□ 0.07
PTCD2Q8WV60 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
PTCD2Q8WV60 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PTCD2Q8WV60 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PTCD2Q8WV60 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms