Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
U2AF1L4Q8WU68 AC104640.1-201ENST00000562617 2109 ntBASIC17.33■□□□□ 0.37
U2AF1L4Q8WU68 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
U2AF1L4Q8WU68 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
U2AF1L4Q8WU68 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
U2AF1L4Q8WU68 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
U2AF1L4Q8WU68 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
U2AF1L4Q8WU68 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.33■□□□□ 0.37
U2AF1L4Q8WU68 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
U2AF1L4Q8WU68 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
U2AF1L4Q8WU68 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
U2AF1L4Q8WU68 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
U2AF1L4Q8WU68 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
U2AF1L4Q8WU68 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
U2AF1L4Q8WU68 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
U2AF1L4Q8WU68 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
U2AF1L4Q8WU68 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
U2AF1L4Q8WU68 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
U2AF1L4Q8WU68 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
U2AF1L4Q8WU68 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
U2AF1L4Q8WU68 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
U2AF1L4Q8WU68 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
U2AF1L4Q8WU68 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC17.33■□□□□ 0.36
U2AF1L4Q8WU68 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC17.33■□□□□ 0.36
U2AF1L4Q8WU68 AC114812.1-204ENST00000449669 728 ntBASIC17.33■□□□□ 0.36
U2AF1L4Q8WU68 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
U2AF1L4Q8WU68 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
U2AF1L4Q8WU68 AL161670.2-201ENST00000557650 1227 ntBASIC17.33■□□□□ 0.36
U2AF1L4Q8WU68 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
U2AF1L4Q8WU68 AF254983.2-201ENST00000612331 135 ntBASIC17.33■□□□□ 0.36
U2AF1L4Q8WU68 RN7SL736P-201ENST00000613111 269 ntBASIC17.33■□□□□ 0.36
U2AF1L4Q8WU68 AC011491.1-203ENST00000637688 543 ntBASIC17.33■□□□□ 0.36
U2AF1L4Q8WU68 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
U2AF1L4Q8WU68 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
U2AF1L4Q8WU68 AC126177.1-201ENST00000547829 2218 ntBASIC17.33■□□□□ 0.36
U2AF1L4Q8WU68 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
U2AF1L4Q8WU68 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.33■□□□□ 0.36
U2AF1L4Q8WU68 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
U2AF1L4Q8WU68 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
U2AF1L4Q8WU68 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
U2AF1L4Q8WU68 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
U2AF1L4Q8WU68 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
U2AF1L4Q8WU68 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
U2AF1L4Q8WU68 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
U2AF1L4Q8WU68 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.32■□□□□ 0.36
U2AF1L4Q8WU68 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.32■□□□□ 0.36
U2AF1L4Q8WU68 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.32■□□□□ 0.36
U2AF1L4Q8WU68 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
U2AF1L4Q8WU68 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
U2AF1L4Q8WU68 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
U2AF1L4Q8WU68 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
U2AF1L4Q8WU68 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
U2AF1L4Q8WU68 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
U2AF1L4Q8WU68 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
U2AF1L4Q8WU68 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
U2AF1L4Q8WU68 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
U2AF1L4Q8WU68 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
U2AF1L4Q8WU68 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
U2AF1L4Q8WU68 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC17.32■□□□□ 0.36
U2AF1L4Q8WU68 FAM8A4P-201ENST00000435433 1213 ntBASIC17.32■□□□□ 0.36
U2AF1L4Q8WU68 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC17.32■□□□□ 0.36
U2AF1L4Q8WU68 PGAM1P5-201ENST00000548011 764 ntBASIC17.32■□□□□ 0.36
U2AF1L4Q8WU68 AC073352.2-201ENST00000609385 439 ntBASIC17.32■□□□□ 0.36
U2AF1L4Q8WU68 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.32■□□□□ 0.36
U2AF1L4Q8WU68 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
U2AF1L4Q8WU68 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
U2AF1L4Q8WU68 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
U2AF1L4Q8WU68 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
U2AF1L4Q8WU68 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
U2AF1L4Q8WU68 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
U2AF1L4Q8WU68 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.32■□□□□ 0.36
U2AF1L4Q8WU68 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
U2AF1L4Q8WU68 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
U2AF1L4Q8WU68 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
U2AF1L4Q8WU68 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
U2AF1L4Q8WU68 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
U2AF1L4Q8WU68 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
U2AF1L4Q8WU68 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
U2AF1L4Q8WU68 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
U2AF1L4Q8WU68 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.31■□□□□ 0.36
U2AF1L4Q8WU68 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
U2AF1L4Q8WU68 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
U2AF1L4Q8WU68 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.31■□□□□ 0.36
U2AF1L4Q8WU68 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
U2AF1L4Q8WU68 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
U2AF1L4Q8WU68 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
U2AF1L4Q8WU68 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
U2AF1L4Q8WU68 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
U2AF1L4Q8WU68 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
U2AF1L4Q8WU68 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
U2AF1L4Q8WU68 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC17.31■□□□□ 0.36
U2AF1L4Q8WU68 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
U2AF1L4Q8WU68 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.31■□□□□ 0.36
U2AF1L4Q8WU68 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
U2AF1L4Q8WU68 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC17.31■□□□□ 0.36
U2AF1L4Q8WU68 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.31■□□□□ 0.36
U2AF1L4Q8WU68 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
U2AF1L4Q8WU68 ENPP7P14-201ENST00000621765 1040 ntBASIC17.31■□□□□ 0.36
U2AF1L4Q8WU68 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC17.31■□□□□ 0.36
U2AF1L4Q8WU68 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms