Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.98■□□□□ 0.15
CCDC33Q8N5R6 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC33Q8N5R6 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC33Q8N5R6 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.97■□□□□ 0.15
CCDC33Q8N5R6 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC33Q8N5R6 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC33Q8N5R6 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.97■□□□□ 0.15
CCDC33Q8N5R6 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC33Q8N5R6 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CCDC33Q8N5R6 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC33Q8N5R6 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.97■□□□□ 0.15
CCDC33Q8N5R6 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CCDC33Q8N5R6 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.97■□□□□ 0.15
CCDC33Q8N5R6 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC33Q8N5R6 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CCDC33Q8N5R6 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC33Q8N5R6 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC33Q8N5R6 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.97■□□□□ 0.15
CCDC33Q8N5R6 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC33Q8N5R6 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.97■□□□□ 0.15
CCDC33Q8N5R6 AL355864.2-201ENST00000447420 863 ntBASIC15.97■□□□□ 0.15
CCDC33Q8N5R6 CSF2RBP1-201ENST00000447905 391 ntBASIC15.97■□□□□ 0.15
CCDC33Q8N5R6 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC33Q8N5R6 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.97■□□□□ 0.15
CCDC33Q8N5R6 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.97■□□□□ 0.15
CCDC33Q8N5R6 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.97■□□□□ 0.15
CCDC33Q8N5R6 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.97■□□□□ 0.15
CCDC33Q8N5R6 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.97■□□□□ 0.15
CCDC33Q8N5R6 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.97■□□□□ 0.15
CCDC33Q8N5R6 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC33Q8N5R6 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.97■□□□□ 0.15
CCDC33Q8N5R6 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.97■□□□□ 0.15
CCDC33Q8N5R6 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.97■□□□□ 0.15
CCDC33Q8N5R6 CICP24-201ENST00000605464 2705 ntBASIC15.97■□□□□ 0.15
CCDC33Q8N5R6 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CCDC33Q8N5R6 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CCDC33Q8N5R6 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC33Q8N5R6 AC126365.1-201ENST00000578585 1514 ntBASIC15.97■□□□□ 0.15
CCDC33Q8N5R6 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC33Q8N5R6 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC33Q8N5R6 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC33Q8N5R6 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC33Q8N5R6 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC33Q8N5R6 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC33Q8N5R6 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.97■□□□□ 0.15
CCDC33Q8N5R6 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CCDC33Q8N5R6 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC33Q8N5R6 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC33Q8N5R6 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CCDC33Q8N5R6 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC33Q8N5R6 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC33Q8N5R6 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC33Q8N5R6 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC33Q8N5R6 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC33Q8N5R6 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC33Q8N5R6 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC33Q8N5R6 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.96■□□□□ 0.15
CCDC33Q8N5R6 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC33Q8N5R6 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC33Q8N5R6 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC33Q8N5R6 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CCDC33Q8N5R6 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC33Q8N5R6 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC33Q8N5R6 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CCDC33Q8N5R6 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC33Q8N5R6 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC33Q8N5R6 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC33Q8N5R6 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CCDC33Q8N5R6 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CCDC33Q8N5R6 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC33Q8N5R6 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CCDC33Q8N5R6 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC33Q8N5R6 AC005229.1-201ENST00000392885 409 ntBASIC15.96■□□□□ 0.15
CCDC33Q8N5R6 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC33Q8N5R6 BRWD1P1-201ENST00000401091 371 ntBASIC15.96■□□□□ 0.15
CCDC33Q8N5R6 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC33Q8N5R6 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CCDC33Q8N5R6 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.96■□□□□ 0.15
CCDC33Q8N5R6 AC007551.1-201ENST00000457394 519 ntBASIC15.96■□□□□ 0.15
CCDC33Q8N5R6 KRT18P43-201ENST00000469825 1281 ntBASIC15.96■□□□□ 0.15
CCDC33Q8N5R6 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC33Q8N5R6 CLUHP6-201ENST00000580789 941 ntBASIC15.96■□□□□ 0.15
CCDC33Q8N5R6 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC33Q8N5R6 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC33Q8N5R6 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CCDC33Q8N5R6 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CCDC33Q8N5R6 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.96■□□□□ 0.15
CCDC33Q8N5R6 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC33Q8N5R6 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC33Q8N5R6 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC33Q8N5R6 MSTO2P-201ENST00000314835 1709 ntBASIC15.96■□□□□ 0.15
CCDC33Q8N5R6 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC33Q8N5R6 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CCDC33Q8N5R6 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
CCDC33Q8N5R6 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
CCDC33Q8N5R6 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CCDC33Q8N5R6 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.96■□□□□ 0.14
CCDC33Q8N5R6 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.96■□□□□ 0.14
CCDC33Q8N5R6 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
CCDC33Q8N5R6 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms