Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AC005730.2-201ENST00000564549 1184 ntBASIC16.87■□□□□ 0.29
TRIM50Q86XT4 MIR4683-201ENST00000579659 81 ntBASIC16.87■□□□□ 0.29
TRIM50Q86XT4 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC16.87■□□□□ 0.29
TRIM50Q86XT4 AP001002.3-201ENST00000623482 206 ntBASIC16.87■□□□□ 0.29
TRIM50Q86XT4 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM50Q86XT4 AC112693.3-201ENST00000624819 1983 ntBASIC16.87■□□□□ 0.29
TRIM50Q86XT4 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM50Q86XT4 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM50Q86XT4 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
TRIM50Q86XT4 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM50Q86XT4 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM50Q86XT4 INE2-201ENST00000630399 1874 ntBASIC16.86■□□□□ 0.29
TRIM50Q86XT4 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM50Q86XT4 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM50Q86XT4 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM50Q86XT4 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.86■□□□□ 0.29
TRIM50Q86XT4 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM50Q86XT4 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM50Q86XT4 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TRIM50Q86XT4 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM50Q86XT4 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM50Q86XT4 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM50Q86XT4 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM50Q86XT4 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM50Q86XT4 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM50Q86XT4 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
TRIM50Q86XT4 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM50Q86XT4 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM50Q86XT4 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM50Q86XT4 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM50Q86XT4 CHMP1AP1-201ENST00000445563 662 ntBASIC16.86■□□□□ 0.29
TRIM50Q86XT4 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
TRIM50Q86XT4 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC16.86■□□□□ 0.29
TRIM50Q86XT4 TPI1-206ENST00000488464 791 ntTSL 5 BASIC16.86■□□□□ 0.29
TRIM50Q86XT4 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.86■□□□□ 0.29
TRIM50Q86XT4 MESTP3-201ENST00000503460 968 ntBASIC16.86■□□□□ 0.29
TRIM50Q86XT4 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM50Q86XT4 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TRIM50Q86XT4 ZACNP1-201ENST00000612259 710 ntBASIC16.86■□□□□ 0.29
TRIM50Q86XT4 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
TRIM50Q86XT4 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM50Q86XT4 AL603764.1-201ENST00000636452 321 ntBASIC16.86■□□□□ 0.29
TRIM50Q86XT4 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM50Q86XT4 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.86■□□□□ 0.29
TRIM50Q86XT4 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM50Q86XT4 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM50Q86XT4 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
TRIM50Q86XT4 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM50Q86XT4 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM50Q86XT4 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM50Q86XT4 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM50Q86XT4 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM50Q86XT4 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM50Q86XT4 AC009093.2-202ENST00000620513 2079 ntBASIC16.85■□□□□ 0.29
TRIM50Q86XT4 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM50Q86XT4 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TRIM50Q86XT4 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
TRIM50Q86XT4 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
TRIM50Q86XT4 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM50Q86XT4 AC126755.1-201ENST00000525846 6405 ntBASIC16.85■□□□□ 0.29
TRIM50Q86XT4 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM50Q86XT4 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM50Q86XT4 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC16.85■□□□□ 0.29
TRIM50Q86XT4 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM50Q86XT4 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.85■□□□□ 0.29
TRIM50Q86XT4 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM50Q86XT4 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
TRIM50Q86XT4 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM50Q86XT4 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.85■□□□□ 0.29
TRIM50Q86XT4 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM50Q86XT4 AC004898.1-201ENST00000451057 766 ntBASIC16.85■□□□□ 0.29
TRIM50Q86XT4 APOA2-204ENST00000464492 530 ntTSL 3 BASIC16.85■□□□□ 0.29
TRIM50Q86XT4 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC16.85■□□□□ 0.29
TRIM50Q86XT4 FTLP10-202ENST00000505798 471 ntBASIC16.85■□□□□ 0.29
TRIM50Q86XT4 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.85■□□□□ 0.29
TRIM50Q86XT4 ACTG1P17-201ENST00000558391 1119 ntBASIC16.85■□□□□ 0.29
TRIM50Q86XT4 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC16.85■□□□□ 0.29
TRIM50Q86XT4 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM50Q86XT4 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM50Q86XT4 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.85■□□□□ 0.29
TRIM50Q86XT4 AC244157.2-201ENST00000616239 1006 ntBASIC16.85■□□□□ 0.29
TRIM50Q86XT4 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM50Q86XT4 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM50Q86XT4 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM50Q86XT4 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.85■□□□□ 0.29
TRIM50Q86XT4 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM50Q86XT4 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
TRIM50Q86XT4 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.85■□□□□ 0.29
TRIM50Q86XT4 AP000845.1-201ENST00000581677 2131 ntBASIC16.85■□□□□ 0.29
TRIM50Q86XT4 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM50Q86XT4 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM50Q86XT4 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM50Q86XT4 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM50Q86XT4 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM50Q86XT4 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM50Q86XT4 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM50Q86XT4 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.84■□□□□ 0.29
TRIM50Q86XT4 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TRIM50Q86XT4 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM50Q86XT4 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms