Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
LYSMD4Q5XG99 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 FAM90A2P-201ENST00000511144 1395 ntBASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 FAM90A25P-201ENST00000528404 1395 ntBASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 AC020916.1-201ENST00000587762 1774 ntBASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 AC074138.1-201ENST00000611182 1303 ntBASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 STUB1-204ENST00000564370 875 ntTSL 2 BASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 Z98259.2-201ENST00000641583 609 ntBASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 AC009090.5-201ENST00000624886 2285 ntBASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC14.73□□□□□ -0.05
LYSMD4Q5XG99 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD4Q5XG99 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD4Q5XG99 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD4Q5XG99 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
LYSMD4Q5XG99 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.72□□□□□ -0.05
LYSMD4Q5XG99 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD4Q5XG99 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD4Q5XG99 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD4Q5XG99 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC14.72□□□□□ -0.05
LYSMD4Q5XG99 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD4Q5XG99 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD4Q5XG99 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD4Q5XG99 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD4Q5XG99 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.72□□□□□ -0.05
LYSMD4Q5XG99 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
LYSMD4Q5XG99 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.72□□□□□ -0.05
LYSMD4Q5XG99 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.72□□□□□ -0.05
LYSMD4Q5XG99 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD4Q5XG99 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC14.72□□□□□ -0.05
LYSMD4Q5XG99 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.72□□□□□ -0.05
LYSMD4Q5XG99 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD4Q5XG99 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC14.72□□□□□ -0.05
LYSMD4Q5XG99 RPL8P2-201ENST00000430538 502 ntBASIC14.72□□□□□ -0.05
LYSMD4Q5XG99 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC14.72□□□□□ -0.05
LYSMD4Q5XG99 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC14.72□□□□□ -0.05
LYSMD4Q5XG99 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.72□□□□□ -0.05
LYSMD4Q5XG99 AC079112.1-201ENST00000454972 939 ntBASIC14.72□□□□□ -0.05
LYSMD4Q5XG99 RN7SL67P-201ENST00000492147 296 ntBASIC14.72□□□□□ -0.05
LYSMD4Q5XG99 AC008723.1-201ENST00000506922 207 ntBASIC14.72□□□□□ -0.05
LYSMD4Q5XG99 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.72□□□□□ -0.05
LYSMD4Q5XG99 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
LYSMD4Q5XG99 CFL1-206ENST00000527344 962 ntTSL 2 BASIC14.72□□□□□ -0.05
LYSMD4Q5XG99 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD4Q5XG99 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
LYSMD4Q5XG99 TPM1-223ENST00000560445 485 ntTSL 3 BASIC14.72□□□□□ -0.05
LYSMD4Q5XG99 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.72□□□□□ -0.05
LYSMD4Q5XG99 AC087045.2-201ENST00000606279 1003 ntBASIC14.72□□□□□ -0.05
LYSMD4Q5XG99 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC14.72□□□□□ -0.05
LYSMD4Q5XG99 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.72□□□□□ -0.05
LYSMD4Q5XG99 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.72□□□□□ -0.05
LYSMD4Q5XG99 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD4Q5XG99 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC14.72□□□□□ -0.05
LYSMD4Q5XG99 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
LYSMD4Q5XG99 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.72□□□□□ -0.05
LYSMD4Q5XG99 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
LYSMD4Q5XG99 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms