Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.93■□□□□ 0.14
PTPN20Q4JDL3 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PTPN20Q4JDL3 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PTPN20Q4JDL3 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.93■□□□□ 0.14
PTPN20Q4JDL3 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PTPN20Q4JDL3 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTPN20Q4JDL3 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTPN20Q4JDL3 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTPN20Q4JDL3 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTPN20Q4JDL3 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTPN20Q4JDL3 AL512384.1-201ENST00000406683 331 ntBASIC15.93■□□□□ 0.14
PTPN20Q4JDL3 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.93■□□□□ 0.14
PTPN20Q4JDL3 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.93■□□□□ 0.14
PTPN20Q4JDL3 AC007389.4-201ENST00000454674 793 ntBASIC15.93■□□□□ 0.14
PTPN20Q4JDL3 USP32P1-208ENST00000506594 1164 ntBASIC15.93■□□□□ 0.14
PTPN20Q4JDL3 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
PTPN20Q4JDL3 AP001889.1-201ENST00000525414 633 ntBASIC15.93■□□□□ 0.14
PTPN20Q4JDL3 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PTPN20Q4JDL3 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
PTPN20Q4JDL3 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.93■□□□□ 0.14
PTPN20Q4JDL3 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.93■□□□□ 0.14
PTPN20Q4JDL3 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PTPN20Q4JDL3 AC145423.3-201ENST00000615987 467 ntBASIC15.93■□□□□ 0.14
PTPN20Q4JDL3 AL603764.1-201ENST00000636452 321 ntBASIC15.93■□□□□ 0.14
PTPN20Q4JDL3 AC105233.6-201ENST00000642093 218 ntBASIC15.93■□□□□ 0.14
PTPN20Q4JDL3 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.93■□□□□ 0.14
PTPN20Q4JDL3 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTPN20Q4JDL3 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PTPN20Q4JDL3 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTPN20Q4JDL3 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.93■□□□□ 0.14
PTPN20Q4JDL3 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
PTPN20Q4JDL3 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
PTPN20Q4JDL3 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
PTPN20Q4JDL3 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTPN20Q4JDL3 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTPN20Q4JDL3 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
PTPN20Q4JDL3 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PTPN20Q4JDL3 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN20Q4JDL3 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.92■□□□□ 0.14
PTPN20Q4JDL3 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
PTPN20Q4JDL3 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN20Q4JDL3 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN20Q4JDL3 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN20Q4JDL3 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.92■□□□□ 0.14
PTPN20Q4JDL3 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PTPN20Q4JDL3 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN20Q4JDL3 COX20P2-201ENST00000452636 358 ntBASIC15.92■□□□□ 0.14
PTPN20Q4JDL3 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
PTPN20Q4JDL3 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.92■□□□□ 0.14
PTPN20Q4JDL3 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
PTPN20Q4JDL3 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.92■□□□□ 0.14
PTPN20Q4JDL3 AC008735.3-201ENST00000596646 500 ntBASIC15.92■□□□□ 0.14
PTPN20Q4JDL3 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.92■□□□□ 0.14
PTPN20Q4JDL3 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.92■□□□□ 0.14
PTPN20Q4JDL3 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN20Q4JDL3 AC099063.4-201ENST00000641099 1602 ntBASIC15.92■□□□□ 0.14
PTPN20Q4JDL3 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN20Q4JDL3 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
PTPN20Q4JDL3 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN20Q4JDL3 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN20Q4JDL3 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN20Q4JDL3 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
PTPN20Q4JDL3 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.92■□□□□ 0.14
PTPN20Q4JDL3 CU639417.3-201ENST00000624240 1404 ntBASIC15.92■□□□□ 0.14
PTPN20Q4JDL3 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN20Q4JDL3 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PTPN20Q4JDL3 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN20Q4JDL3 AL138709.1-201ENST00000614840 1693 ntBASIC15.92■□□□□ 0.14
PTPN20Q4JDL3 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
PTPN20Q4JDL3 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
PTPN20Q4JDL3 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN20Q4JDL3 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN20Q4JDL3 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN20Q4JDL3 AC232323.1-201ENST00000540724 2099 ntBASIC15.91■□□□□ 0.14
PTPN20Q4JDL3 AC140479.7-201ENST00000636301 2332 ntBASIC15.91■□□□□ 0.14
PTPN20Q4JDL3 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN20Q4JDL3 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.91■□□□□ 0.14
PTPN20Q4JDL3 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN20Q4JDL3 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
PTPN20Q4JDL3 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.91■□□□□ 0.14
PTPN20Q4JDL3 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.91■□□□□ 0.14
PTPN20Q4JDL3 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
PTPN20Q4JDL3 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.91■□□□□ 0.14
PTPN20Q4JDL3 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.91■□□□□ 0.14
PTPN20Q4JDL3 AC018665.1-201ENST00000622927 1362 ntBASIC15.91■□□□□ 0.14
PTPN20Q4JDL3 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
PTPN20Q4JDL3 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
PTPN20Q4JDL3 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN20Q4JDL3 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN20Q4JDL3 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN20Q4JDL3 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.91■□□□□ 0.14
PTPN20Q4JDL3 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.91■□□□□ 0.14
PTPN20Q4JDL3 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.91■□□□□ 0.14
PTPN20Q4JDL3 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.91■□□□□ 0.14
PTPN20Q4JDL3 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.91■□□□□ 0.14
PTPN20Q4JDL3 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.91■□□□□ 0.14
PTPN20Q4JDL3 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
PTPN20Q4JDL3 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN20Q4JDL3 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.91■□□□□ 0.14
PTPN20Q4JDL3 GNRHR2-203ENST00000581100 1187 ntBASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms