Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DDR1Q08345 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC18.51■□□□□ 0.55
DDR1Q08345 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.51■□□□□ 0.55
DDR1Q08345 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.51■□□□□ 0.55
DDR1Q08345 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
DDR1Q08345 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC18.5■□□□□ 0.55
DDR1Q08345 KRT18P9-201ENST00000604826 1300 ntBASIC18.5■□□□□ 0.55
DDR1Q08345 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
DDR1Q08345 AC023090.2-201ENST00000625182 2110 ntBASIC18.5■□□□□ 0.55
DDR1Q08345 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DDR1Q08345 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC18.5■□□□□ 0.55
DDR1Q08345 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
DDR1Q08345 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
DDR1Q08345 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DDR1Q08345 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
DDR1Q08345 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DDR1Q08345 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC18.5■□□□□ 0.55
DDR1Q08345 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DDR1Q08345 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DDR1Q08345 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DDR1Q08345 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DDR1Q08345 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DDR1Q08345 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC18.5■□□□□ 0.55
DDR1Q08345 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
DDR1Q08345 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC18.5■□□□□ 0.55
DDR1Q08345 TSPY25P-201ENST00000429463 745 ntBASIC18.5■□□□□ 0.55
DDR1Q08345 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC18.5■□□□□ 0.55
DDR1Q08345 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC18.5■□□□□ 0.55
DDR1Q08345 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DDR1Q08345 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
DDR1Q08345 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
DDR1Q08345 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC18.5■□□□□ 0.55
DDR1Q08345 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC18.5■□□□□ 0.55
DDR1Q08345 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC18.5■□□□□ 0.55
DDR1Q08345 AP001184.1-201ENST00000637936 376 ntBASIC18.5■□□□□ 0.55
DDR1Q08345 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DDR1Q08345 LILRP1-201ENST00000444199 1370 ntBASIC18.5■□□□□ 0.55
DDR1Q08345 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
DDR1Q08345 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DDR1Q08345 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
DDR1Q08345 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC18.5■□□□□ 0.55
DDR1Q08345 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DDR1Q08345 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DDR1Q08345 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DDR1Q08345 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
DDR1Q08345 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
DDR1Q08345 REXO1L2P-201ENST00000425429 2069 ntBASIC18.5■□□□□ 0.55
DDR1Q08345 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC18.49■□□□□ 0.55
DDR1Q08345 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC18.49■□□□□ 0.55
DDR1Q08345 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDR1Q08345 TMBIM7P-202ENST00000641474 1516 ntBASIC18.49■□□□□ 0.55
DDR1Q08345 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DDR1Q08345 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
DDR1Q08345 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC18.49■□□□□ 0.55
DDR1Q08345 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.49■□□□□ 0.55
DDR1Q08345 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDR1Q08345 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDR1Q08345 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.49■□□□□ 0.55
DDR1Q08345 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.49■□□□□ 0.55
DDR1Q08345 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC18.49■□□□□ 0.55
DDR1Q08345 AL357563.1-201ENST00000404728 395 ntBASIC18.49■□□□□ 0.55
DDR1Q08345 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DDR1Q08345 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC18.49■□□□□ 0.55
DDR1Q08345 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
DDR1Q08345 ORAOV1P1-201ENST00000503108 395 ntBASIC18.49■□□□□ 0.55
DDR1Q08345 ALG1L6P-201ENST00000515248 758 ntBASIC18.49■□□□□ 0.55
DDR1Q08345 AC131206.1-201ENST00000538078 1211 ntBASIC18.49■□□□□ 0.55
DDR1Q08345 MIR5196-201ENST00000578146 115 ntBASIC18.49■□□□□ 0.55
DDR1Q08345 AC087392.5-201ENST00000612517 489 ntBASIC18.49■□□□□ 0.55
DDR1Q08345 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDR1Q08345 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDR1Q08345 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDR1Q08345 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDR1Q08345 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDR1Q08345 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDR1Q08345 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDR1Q08345 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.49■□□□□ 0.55
DDR1Q08345 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DDR1Q08345 AC103702.1-201ENST00000548801 2630 ntBASIC18.49■□□□□ 0.55
DDR1Q08345 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.49■□□□□ 0.55
DDR1Q08345 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC18.49■□□□□ 0.55
DDR1Q08345 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC18.49■□□□□ 0.55
DDR1Q08345 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDR1Q08345 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDR1Q08345 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
DDR1Q08345 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
DDR1Q08345 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
DDR1Q08345 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDR1Q08345 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDR1Q08345 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC18.48■□□□□ 0.55
DDR1Q08345 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDR1Q08345 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC18.48■□□□□ 0.55
DDR1Q08345 AC090502.4-201ENST00000551714 1386 ntBASIC18.48■□□□□ 0.55
DDR1Q08345 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
DDR1Q08345 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
DDR1Q08345 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
DDR1Q08345 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC18.48■□□□□ 0.55
DDR1Q08345 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC18.48■□□□□ 0.55
DDR1Q08345 REEP5-205ENST00000504247 480 ntTSL 5 BASIC18.48■□□□□ 0.55
DDR1Q08345 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms