Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.66■□□□□ 0.74
COL16A1Q07092 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC19.66■□□□□ 0.74
COL16A1Q07092 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
COL16A1Q07092 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC19.66■□□□□ 0.74
COL16A1Q07092 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL16A1Q07092 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL16A1Q07092 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.66■□□□□ 0.74
COL16A1Q07092 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
COL16A1Q07092 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.66■□□□□ 0.74
COL16A1Q07092 AC080080.1-201ENST00000625121 2420 ntBASIC19.66■□□□□ 0.74
COL16A1Q07092 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL16A1Q07092 AC009093.10-201ENST00000641956 1442 ntBASIC19.66■□□□□ 0.74
COL16A1Q07092 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL16A1Q07092 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL16A1Q07092 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
COL16A1Q07092 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL16A1Q07092 AC022080.1-201ENST00000366255 781 ntBASIC19.65■□□□□ 0.74
COL16A1Q07092 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
COL16A1Q07092 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC19.65■□□□□ 0.74
COL16A1Q07092 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC19.65■□□□□ 0.74
COL16A1Q07092 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC19.65■□□□□ 0.74
COL16A1Q07092 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL16A1Q07092 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC19.65■□□□□ 0.74
COL16A1Q07092 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC19.65■□□□□ 0.74
COL16A1Q07092 RN7SL602P-201ENST00000578326 324 ntBASIC19.65■□□□□ 0.74
COL16A1Q07092 RN7SL718P-201ENST00000581254 303 ntBASIC19.65■□□□□ 0.74
COL16A1Q07092 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC19.65■□□□□ 0.74
COL16A1Q07092 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
COL16A1Q07092 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC19.65■□□□□ 0.74
COL16A1Q07092 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL16A1Q07092 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
COL16A1Q07092 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL16A1Q07092 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL16A1Q07092 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL16A1Q07092 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL16A1Q07092 AC019109.1-201ENST00000401725 1874 ntBASIC19.65■□□□□ 0.74
COL16A1Q07092 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL16A1Q07092 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.65■□□□□ 0.74
COL16A1Q07092 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL16A1Q07092 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL16A1Q07092 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL16A1Q07092 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
COL16A1Q07092 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL16A1Q07092 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL16A1Q07092 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL16A1Q07092 FAM197Y6-201ENST00000420524 766 ntBASIC19.65■□□□□ 0.74
COL16A1Q07092 AL080243.1-201ENST00000423293 1060 ntBASIC19.65■□□□□ 0.74
COL16A1Q07092 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL16A1Q07092 AC120498.7-201ENST00000562876 330 ntBASIC19.65■□□□□ 0.74
COL16A1Q07092 MIR4254-201ENST00000581063 76 ntBASIC19.65■□□□□ 0.74
COL16A1Q07092 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC19.65■□□□□ 0.74
COL16A1Q07092 TYMSP2-201ENST00000589501 424 ntBASIC19.65■□□□□ 0.74
COL16A1Q07092 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC19.65■□□□□ 0.74
COL16A1Q07092 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC19.65■□□□□ 0.74
COL16A1Q07092 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL16A1Q07092 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC19.65■□□□□ 0.74
COL16A1Q07092 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
COL16A1Q07092 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
COL16A1Q07092 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
COL16A1Q07092 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
COL16A1Q07092 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
COL16A1Q07092 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL16A1Q07092 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
COL16A1Q07092 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
COL16A1Q07092 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL16A1Q07092 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC19.64■□□□□ 0.73
COL16A1Q07092 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC19.64■□□□□ 0.73
COL16A1Q07092 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC19.64■□□□□ 0.73
COL16A1Q07092 AL357143.1-203ENST00000639750 881 ntBASIC19.64■□□□□ 0.73
COL16A1Q07092 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL16A1Q07092 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC19.64■□□□□ 0.73
COL16A1Q07092 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC19.64■□□□□ 0.73
COL16A1Q07092 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL16A1Q07092 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
COL16A1Q07092 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC19.64■□□□□ 0.73
COL16A1Q07092 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC19.64■□□□□ 0.73
COL16A1Q07092 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC19.64■□□□□ 0.73
COL16A1Q07092 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.63■□□□□ 0.73
COL16A1Q07092 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL16A1Q07092 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL16A1Q07092 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL16A1Q07092 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL16A1Q07092 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
COL16A1Q07092 PSAT1P2-201ENST00000426107 972 ntBASIC19.63■□□□□ 0.73
COL16A1Q07092 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC19.63■□□□□ 0.73
COL16A1Q07092 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC19.63■□□□□ 0.73
COL16A1Q07092 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC19.63■□□□□ 0.73
COL16A1Q07092 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC19.63■□□□□ 0.73
COL16A1Q07092 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC19.63■□□□□ 0.73
COL16A1Q07092 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC19.63■□□□□ 0.73
COL16A1Q07092 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC19.63■□□□□ 0.73
COL16A1Q07092 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC19.63■□□□□ 0.73
COL16A1Q07092 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC19.63■□□□□ 0.73
COL16A1Q07092 KLF17P1-201ENST00000547105 1126 ntBASIC19.63■□□□□ 0.73
COL16A1Q07092 SRP14-208ENST00000560773 468 ntTSL 3 BASIC19.63■□□□□ 0.73
COL16A1Q07092 NEK4P3-201ENST00000604859 544 ntBASIC19.63■□□□□ 0.73
COL16A1Q07092 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC19.63■□□□□ 0.73
COL16A1Q07092 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC19.63■□□□□ 0.73
COL16A1Q07092 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL16A1Q07092 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms