Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.87□□□□□ -0.19
CXCR4P61073 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CXCR4P61073 RARRES2P9-201ENST00000565168 469 ntBASIC13.87□□□□□ -0.19
CXCR4P61073 KLK8-205ENST00000593490 267 ntTSL 3 BASIC13.87□□□□□ -0.19
CXCR4P61073 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC13.87□□□□□ -0.19
CXCR4P61073 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.87□□□□□ -0.19
CXCR4P61073 BX640515.1-201ENST00000617215 977 ntBASIC13.87□□□□□ -0.19
CXCR4P61073 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.87□□□□□ -0.19
CXCR4P61073 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CXCR4P61073 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.87□□□□□ -0.19
CXCR4P61073 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.87□□□□□ -0.19
CXCR4P61073 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CXCR4P61073 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CXCR4P61073 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CXCR4P61073 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
CXCR4P61073 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CXCR4P61073 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CXCR4P61073 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CXCR4P61073 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CXCR4P61073 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
CXCR4P61073 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CXCR4P61073 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.86□□□□□ -0.19
CXCR4P61073 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CXCR4P61073 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.86□□□□□ -0.19
CXCR4P61073 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CXCR4P61073 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CXCR4P61073 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.86□□□□□ -0.19
CXCR4P61073 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CXCR4P61073 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CXCR4P61073 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.86□□□□□ -0.19
CXCR4P61073 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CXCR4P61073 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CXCR4P61073 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CXCR4P61073 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CXCR4P61073 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CXCR4P61073 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC13.86□□□□□ -0.19
CXCR4P61073 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.86□□□□□ -0.19
CXCR4P61073 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CXCR4P61073 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.86□□□□□ -0.19
CXCR4P61073 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CXCR4P61073 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
CXCR4P61073 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.86□□□□□ -0.19
CXCR4P61073 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.86□□□□□ -0.19
CXCR4P61073 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CXCR4P61073 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.86□□□□□ -0.19
CXCR4P61073 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CXCR4P61073 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CXCR4P61073 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CXCR4P61073 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CXCR4P61073 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CXCR4P61073 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.86□□□□□ -0.19
CXCR4P61073 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.86□□□□□ -0.19
CXCR4P61073 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.86□□□□□ -0.19
CXCR4P61073 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CXCR4P61073 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CXCR4P61073 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CXCR4P61073 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CXCR4P61073 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.86□□□□□ -0.19
CXCR4P61073 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CXCR4P61073 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CXCR4P61073 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CXCR4P61073 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CXCR4P61073 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
CXCR4P61073 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.85□□□□□ -0.19
CXCR4P61073 AC018665.1-201ENST00000622927 1362 ntBASIC13.85□□□□□ -0.19
CXCR4P61073 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CXCR4P61073 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.85□□□□□ -0.19
CXCR4P61073 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CXCR4P61073 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CXCR4P61073 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CXCR4P61073 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CXCR4P61073 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.85□□□□□ -0.19
CXCR4P61073 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CXCR4P61073 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.85□□□□□ -0.19
CXCR4P61073 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CXCR4P61073 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CXCR4P61073 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CXCR4P61073 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.85□□□□□ -0.19
CXCR4P61073 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CXCR4P61073 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CXCR4P61073 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CXCR4P61073 YBX2P1-201ENST00000394192 760 ntBASIC13.85□□□□□ -0.19
CXCR4P61073 FO393414.2-201ENST00000405153 598 ntBASIC13.85□□□□□ -0.19
CXCR4P61073 AL592309.1-201ENST00000443127 649 ntBASIC13.85□□□□□ -0.19
CXCR4P61073 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.85□□□□□ -0.19
CXCR4P61073 AC069335.1-201ENST00000489972 472 ntBASIC13.85□□□□□ -0.19
CXCR4P61073 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CXCR4P61073 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.85□□□□□ -0.19
CXCR4P61073 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.85□□□□□ -0.19
CXCR4P61073 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.85□□□□□ -0.19
CXCR4P61073 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.85□□□□□ -0.19
CXCR4P61073 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.85□□□□□ -0.19
CXCR4P61073 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CXCR4P61073 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CXCR4P61073 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CXCR4P61073 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CXCR4P61073 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CXCR4P61073 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CXCR4P61073 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CXCR4P61073 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms