Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
PDX1P52945 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.74□□□□□ -0.05
PDX1P52945 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.74□□□□□ -0.05
PDX1P52945 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PDX1P52945 AC067930.6-201ENST00000623257 4947 ntBASIC14.74□□□□□ -0.05
PDX1P52945 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
PDX1P52945 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDX1P52945 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDX1P52945 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.74□□□□□ -0.05
PDX1P52945 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDX1P52945 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PDX1P52945 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
PDX1P52945 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC14.74□□□□□ -0.05
PDX1P52945 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC14.74□□□□□ -0.05
PDX1P52945 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.74□□□□□ -0.05
PDX1P52945 CNN2P10-201ENST00000443067 918 ntBASIC14.74□□□□□ -0.05
PDX1P52945 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.74□□□□□ -0.05
PDX1P52945 AC091804.1-201ENST00000486888 567 ntBASIC14.74□□□□□ -0.05
PDX1P52945 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.74□□□□□ -0.05
PDX1P52945 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDX1P52945 AC104982.3-201ENST00000581995 514 ntBASIC14.74□□□□□ -0.05
PDX1P52945 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC14.74□□□□□ -0.05
PDX1P52945 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.74□□□□□ -0.05
PDX1P52945 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDX1P52945 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
PDX1P52945 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDX1P52945 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
PDX1P52945 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDX1P52945 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDX1P52945 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDX1P52945 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.74□□□□□ -0.05
PDX1P52945 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.74□□□□□ -0.05
PDX1P52945 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
PDX1P52945 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.74□□□□□ -0.05
PDX1P52945 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.74□□□□□ -0.05
PDX1P52945 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PDX1P52945 AL513477.1-201ENST00000602865 2407 ntBASIC14.74□□□□□ -0.05
PDX1P52945 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDX1P52945 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDX1P52945 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PDX1P52945 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PDX1P52945 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.74□□□□□ -0.05
PDX1P52945 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PDX1P52945 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PDX1P52945 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.74□□□□□ -0.05
PDX1P52945 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
PDX1P52945 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDX1P52945 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDX1P52945 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.73□□□□□ -0.05
PDX1P52945 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDX1P52945 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PDX1P52945 AL354989.2-201ENST00000435838 1540 ntBASIC14.73□□□□□ -0.05
PDX1P52945 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.73□□□□□ -0.05
PDX1P52945 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PDX1P52945 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDX1P52945 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
PDX1P52945 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.73□□□□□ -0.05
PDX1P52945 SLC25A24P2-201ENST00000415059 510 ntBASIC14.73□□□□□ -0.05
PDX1P52945 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.73□□□□□ -0.05
PDX1P52945 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.73□□□□□ -0.05
PDX1P52945 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.73□□□□□ -0.05
PDX1P52945 AC114812.1-204ENST00000449669 728 ntBASIC14.73□□□□□ -0.05
PDX1P52945 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.73□□□□□ -0.05
PDX1P52945 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PDX1P52945 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.73□□□□□ -0.05
PDX1P52945 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.73□□□□□ -0.05
PDX1P52945 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.73□□□□□ -0.05
PDX1P52945 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.73□□□□□ -0.05
PDX1P52945 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.73□□□□□ -0.05
PDX1P52945 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.73□□□□□ -0.05
PDX1P52945 PRSS30P-206ENST00000641773 873 ntBASIC14.73□□□□□ -0.05
PDX1P52945 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
PDX1P52945 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.73□□□□□ -0.05
PDX1P52945 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDX1P52945 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PDX1P52945 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
PDX1P52945 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PDX1P52945 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PDX1P52945 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.73□□□□□ -0.05
PDX1P52945 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.73□□□□□ -0.05
PDX1P52945 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.73□□□□□ -0.05
PDX1P52945 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PDX1P52945 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
PDX1P52945 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDX1P52945 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDX1P52945 MST1L-201ENST00000442552 2185 ntBASIC14.73□□□□□ -0.05
PDX1P52945 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDX1P52945 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.73□□□□□ -0.05
PDX1P52945 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDX1P52945 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDX1P52945 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDX1P52945 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PDX1P52945 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDX1P52945 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
PDX1P52945 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDX1P52945 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PDX1P52945 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
PDX1P52945 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
PDX1P52945 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
PDX1P52945 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms