Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GTF2A1P52655 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC14.94□□□□□ -0.02
GTF2A1P52655 AC090616.6-201ENST00000582640 721 ntBASIC14.94□□□□□ -0.02
GTF2A1P52655 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GTF2A1P52655 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
GTF2A1P52655 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC14.94□□□□□ -0.02
GTF2A1P52655 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
GTF2A1P52655 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
GTF2A1P52655 NOS3-203ENST00000461406 3644 ntTSL 2 BASIC14.94□□□□□ -0.02
GTF2A1P52655 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GTF2A1P52655 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GTF2A1P52655 ELN-204ENST00000357036 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
GTF2A1P52655 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
GTF2A1P52655 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GTF2A1P52655 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
GTF2A1P52655 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC14.94□□□□□ -0.02
GTF2A1P52655 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
GTF2A1P52655 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GTF2A1P52655 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GTF2A1P52655 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.93□□□□□ -0.02
GTF2A1P52655 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
GTF2A1P52655 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.93□□□□□ -0.02
GTF2A1P52655 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
GTF2A1P52655 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.93□□□□□ -0.02
GTF2A1P52655 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.93□□□□□ -0.02
GTF2A1P52655 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.93□□□□□ -0.02
GTF2A1P52655 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GTF2A1P52655 ALDH1L1-202ENST00000393431 2797 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GTF2A1P52655 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
GTF2A1P52655 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
GTF2A1P52655 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GTF2A1P52655 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
GTF2A1P52655 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
GTF2A1P52655 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
GTF2A1P52655 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
GTF2A1P52655 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GTF2A1P52655 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
GTF2A1P52655 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC14.93□□□□□ -0.02
GTF2A1P52655 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
GTF2A1P52655 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GTF2A1P52655 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GTF2A1P52655 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GTF2A1P52655 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GTF2A1P52655 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GTF2A1P52655 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC14.93□□□□□ -0.02
GTF2A1P52655 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC14.93□□□□□ -0.02
GTF2A1P52655 AC012306.2-201ENST00000609350 630 ntBASIC14.93□□□□□ -0.02
GTF2A1P52655 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GTF2A1P52655 AC007614.4-201ENST00000564048 1827 ntBASIC14.93□□□□□ -0.02
GTF2A1P52655 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
GTF2A1P52655 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GTF2A1P52655 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
GTF2A1P52655 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC14.93□□□□□ -0.02
GTF2A1P52655 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
GTF2A1P52655 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.93□□□□□ -0.02
GTF2A1P52655 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
GTF2A1P52655 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GTF2A1P52655 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GTF2A1P52655 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
GTF2A1P52655 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GTF2A1P52655 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
GTF2A1P52655 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GTF2A1P52655 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GTF2A1P52655 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
GTF2A1P52655 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GTF2A1P52655 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
GTF2A1P52655 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GTF2A1P52655 REXO1L1P-201ENST00000379010 6598 ntBASIC14.93□□□□□ -0.02
GTF2A1P52655 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GTF2A1P52655 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
GTF2A1P52655 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GTF2A1P52655 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
GTF2A1P52655 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC14.92□□□□□ -0.02
GTF2A1P52655 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
GTF2A1P52655 ASAH2B-202ENST00000374007 3715 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
GTF2A1P52655 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
GTF2A1P52655 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GTF2A1P52655 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.92□□□□□ -0.02
GTF2A1P52655 RHPN1-AS1-201ENST00000518049 1918 ntBASIC14.92□□□□□ -0.02
GTF2A1P52655 SYMPK-201ENST00000245934 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GTF2A1P52655 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC14.92□□□□□ -0.02
GTF2A1P52655 STRA6-206ENST00000449139 2732 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
GTF2A1P52655 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GTF2A1P52655 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC14.92□□□□□ -0.02
GTF2A1P52655 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
GTF2A1P52655 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.92□□□□□ -0.02
GTF2A1P52655 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
GTF2A1P52655 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.92□□□□□ -0.02
GTF2A1P52655 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC14.92□□□□□ -0.02
GTF2A1P52655 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GTF2A1P52655 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.92□□□□□ -0.02
GTF2A1P52655 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GTF2A1P52655 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.92□□□□□ -0.02
GTF2A1P52655 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GTF2A1P52655 AC011467.2-201ENST00000598425 242 ntBASIC14.92□□□□□ -0.02
GTF2A1P52655 NDUFV2-AS1-203ENST00000608008 779 ntBASIC14.92□□□□□ -0.02
GTF2A1P52655 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
GTF2A1P52655 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.92□□□□□ -0.02
GTF2A1P52655 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GTF2A1P52655 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms