Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.63□□□□□ -0.07
RAB28P51157 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB28P51157 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.63□□□□□ -0.07
RAB28P51157 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAB28P51157 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.63□□□□□ -0.07
RAB28P51157 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
RAB28P51157 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
RAB28P51157 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB28P51157 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB28P51157 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAB28P51157 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB28P51157 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.63□□□□□ -0.07
RAB28P51157 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
RAB28P51157 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB28P51157 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB28P51157 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB28P51157 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB28P51157 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.62□□□□□ -0.07
RAB28P51157 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB28P51157 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAB28P51157 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB28P51157 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB28P51157 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB28P51157 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB28P51157 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAB28P51157 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB28P51157 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB28P51157 CD8B2-202ENST00000417670 633 ntBASIC14.62□□□□□ -0.07
RAB28P51157 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.62□□□□□ -0.07
RAB28P51157 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAB28P51157 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.62□□□□□ -0.07
RAB28P51157 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
RAB28P51157 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
RAB28P51157 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAB28P51157 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAB28P51157 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.62□□□□□ -0.07
RAB28P51157 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
RAB28P51157 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB28P51157 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB28P51157 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.62□□□□□ -0.07
RAB28P51157 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.62□□□□□ -0.07
RAB28P51157 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.62□□□□□ -0.07
RAB28P51157 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.62□□□□□ -0.07
RAB28P51157 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
RAB28P51157 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.62□□□□□ -0.07
RAB28P51157 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.62□□□□□ -0.07
RAB28P51157 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
RAB28P51157 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
RAB28P51157 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.62□□□□□ -0.07
RAB28P51157 RHOXF1P1-202ENST00000635473 501 ntBASIC14.62□□□□□ -0.07
RAB28P51157 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.62□□□□□ -0.07
RAB28P51157 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB28P51157 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB28P51157 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.62□□□□□ -0.07
RAB28P51157 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.62□□□□□ -0.07
RAB28P51157 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.62□□□□□ -0.07
RAB28P51157 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB28P51157 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB28P51157 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
RAB28P51157 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAB28P51157 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB28P51157 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.62□□□□□ -0.07
RAB28P51157 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
RAB28P51157 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
RAB28P51157 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
RAB28P51157 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB28P51157 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB28P51157 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB28P51157 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAB28P51157 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB28P51157 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.61□□□□□ -0.07
RAB28P51157 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAB28P51157 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.61□□□□□ -0.07
RAB28P51157 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
RAB28P51157 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB28P51157 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
RAB28P51157 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
RAB28P51157 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
RAB28P51157 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB28P51157 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB28P51157 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB28P51157 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB28P51157 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
RAB28P51157 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAB28P51157 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
RAB28P51157 POM121L8P-201ENST00000417732 1281 ntBASIC14.61□□□□□ -0.07
RAB28P51157 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.61□□□□□ -0.07
RAB28P51157 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.61□□□□□ -0.07
RAB28P51157 POM121L9P-203ENST00000441984 1285 ntBASIC14.61□□□□□ -0.07
RAB28P51157 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.61□□□□□ -0.07
RAB28P51157 AC022210.1-201ENST00000449856 793 ntBASIC14.61□□□□□ -0.07
RAB28P51157 FO681548.1-201ENST00000455617 1132 ntBASIC14.61□□□□□ -0.07
RAB28P51157 AL590640.2-201ENST00000457038 527 ntBASIC14.61□□□□□ -0.07
RAB28P51157 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAB28P51157 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
RAB28P51157 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.61□□□□□ -0.07
RAB28P51157 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.61□□□□□ -0.07
RAB28P51157 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.61□□□□□ -0.07
RAB28P51157 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.61□□□□□ -0.07
RAB28P51157 AC078819.1-201ENST00000547454 765 ntBASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms