Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLK1P49759 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.38□□□□□ -0.11
CLK1P49759 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLK1P49759 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.38□□□□□ -0.11
CLK1P49759 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.38□□□□□ -0.11
CLK1P49759 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.38□□□□□ -0.11
CLK1P49759 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLK1P49759 AL158211.3-201ENST00000607385 239 ntBASIC14.38□□□□□ -0.11
CLK1P49759 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLK1P49759 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLK1P49759 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CLK1P49759 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CLK1P49759 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.38□□□□□ -0.11
CLK1P49759 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLK1P49759 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLK1P49759 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CLK1P49759 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLK1P49759 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLK1P49759 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.38□□□□□ -0.11
CLK1P49759 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CLK1P49759 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLK1P49759 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLK1P49759 AC107918.4-201ENST00000641966 3141 ntBASIC14.37□□□□□ -0.11
CLK1P49759 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLK1P49759 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.37□□□□□ -0.11
CLK1P49759 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLK1P49759 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLK1P49759 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.37□□□□□ -0.11
CLK1P49759 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.37□□□□□ -0.11
CLK1P49759 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CLK1P49759 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLK1P49759 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLK1P49759 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CLK1P49759 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLK1P49759 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CLK1P49759 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
CLK1P49759 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLK1P49759 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.37□□□□□ -0.11
CLK1P49759 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLK1P49759 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CLK1P49759 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLK1P49759 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.37□□□□□ -0.11
CLK1P49759 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.37□□□□□ -0.11
CLK1P49759 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLK1P49759 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.37□□□□□ -0.11
CLK1P49759 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLK1P49759 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.37□□□□□ -0.11
CLK1P49759 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.37□□□□□ -0.11
CLK1P49759 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.37□□□□□ -0.11
CLK1P49759 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CLK1P49759 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.37□□□□□ -0.11
CLK1P49759 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.37□□□□□ -0.11
CLK1P49759 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLK1P49759 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.37□□□□□ -0.11
CLK1P49759 AC093028.1-201ENST00000622998 982 ntBASIC14.37□□□□□ -0.11
CLK1P49759 AC005252.3-201ENST00000623855 2258 ntBASIC14.37□□□□□ -0.11
CLK1P49759 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.37□□□□□ -0.11
CLK1P49759 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLK1P49759 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.37□□□□□ -0.11
CLK1P49759 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CLK1P49759 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.37□□□□□ -0.11
CLK1P49759 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
CLK1P49759 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLK1P49759 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.37□□□□□ -0.11
CLK1P49759 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLK1P49759 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLK1P49759 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLK1P49759 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLK1P49759 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLK1P49759 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLK1P49759 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLK1P49759 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CLK1P49759 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLK1P49759 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CLK1P49759 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CLK1P49759 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
CLK1P49759 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CLK1P49759 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
CLK1P49759 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.36□□□□□ -0.11
CLK1P49759 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CLK1P49759 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
CLK1P49759 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CLK1P49759 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLK1P49759 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLK1P49759 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.36□□□□□ -0.11
CLK1P49759 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.36□□□□□ -0.11
CLK1P49759 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLK1P49759 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.36□□□□□ -0.11
CLK1P49759 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.36□□□□□ -0.11
CLK1P49759 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLK1P49759 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLK1P49759 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CLK1P49759 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.36□□□□□ -0.11
CLK1P49759 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLK1P49759 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLK1P49759 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLK1P49759 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
CLK1P49759 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.36□□□□□ -0.11
CLK1P49759 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.36□□□□□ -0.11
CLK1P49759 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms