Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC17.92■□□□□ 0.46
TNNI2P48788 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17.92■□□□□ 0.46
TNNI2P48788 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TNNI2P48788 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TNNI2P48788 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TNNI2P48788 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TNNI2P48788 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
TNNI2P48788 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TNNI2P48788 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TNNI2P48788 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TNNI2P48788 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TNNI2P48788 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
TNNI2P48788 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.91■□□□□ 0.46
TNNI2P48788 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.91■□□□□ 0.46
TNNI2P48788 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TNNI2P48788 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TNNI2P48788 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TNNI2P48788 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TNNI2P48788 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TNNI2P48788 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TNNI2P48788 AC009090.5-201ENST00000624886 2285 ntBASIC17.91■□□□□ 0.46
TNNI2P48788 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
TNNI2P48788 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TNNI2P48788 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.91■□□□□ 0.46
TNNI2P48788 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TNNI2P48788 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TNNI2P48788 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.91■□□□□ 0.46
TNNI2P48788 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.91■□□□□ 0.46
TNNI2P48788 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17.91■□□□□ 0.46
TNNI2P48788 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17.91■□□□□ 0.46
TNNI2P48788 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC17.91■□□□□ 0.46
TNNI2P48788 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC17.91■□□□□ 0.46
TNNI2P48788 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC17.91■□□□□ 0.46
TNNI2P48788 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC17.91■□□□□ 0.46
TNNI2P48788 AC104073.2-201ENST00000453737 312 ntBASIC17.91■□□□□ 0.46
TNNI2P48788 NUP210P1-202ENST00000504322 710 ntBASIC17.91■□□□□ 0.46
TNNI2P48788 MARK2P5-201ENST00000507649 634 ntBASIC17.91■□□□□ 0.46
TNNI2P48788 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC17.91■□□□□ 0.46
TNNI2P48788 HNRNPA1P36-201ENST00000521313 955 ntBASIC17.91■□□□□ 0.46
TNNI2P48788 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17.91■□□□□ 0.46
TNNI2P48788 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TNNI2P48788 MIR3907-201ENST00000579424 151 ntBASIC17.91■□□□□ 0.46
TNNI2P48788 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC17.91■□□□□ 0.46
TNNI2P48788 AC005324.6-201ENST00000587972 613 ntBASIC17.91■□□□□ 0.46
TNNI2P48788 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
TNNI2P48788 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.91■□□□□ 0.46
TNNI2P48788 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TNNI2P48788 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TNNI2P48788 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TNNI2P48788 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.91■□□□□ 0.46
TNNI2P48788 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.91■□□□□ 0.46
TNNI2P48788 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TNNI2P48788 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TNNI2P48788 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TNNI2P48788 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
TNNI2P48788 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TNNI2P48788 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TNNI2P48788 AC068587.6-202ENST00000641839 5619 ntBASIC17.91■□□□□ 0.46
TNNI2P48788 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TNNI2P48788 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TNNI2P48788 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TNNI2P48788 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.91■□□□□ 0.46
TNNI2P48788 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TNNI2P48788 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
TNNI2P48788 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNNI2P48788 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.9■□□□□ 0.46
TNNI2P48788 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
TNNI2P48788 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
TNNI2P48788 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNNI2P48788 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.9■□□□□ 0.46
TNNI2P48788 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
TNNI2P48788 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNNI2P48788 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TNNI2P48788 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TNNI2P48788 SLC16A6P1-201ENST00000413214 1059 ntBASIC17.9■□□□□ 0.46
TNNI2P48788 AC007274.2-201ENST00000421675 662 ntBASIC17.9■□□□□ 0.46
TNNI2P48788 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC17.9■□□□□ 0.46
TNNI2P48788 FAM58BP-201ENST00000439056 645 ntBASIC17.9■□□□□ 0.46
TNNI2P48788 FTLP1-201ENST00000449155 526 ntBASIC17.9■□□□□ 0.46
TNNI2P48788 AC012618.1-201ENST00000461223 412 ntBASIC17.9■□□□□ 0.46
TNNI2P48788 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC17.9■□□□□ 0.46
TNNI2P48788 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNNI2P48788 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC17.9■□□□□ 0.46
TNNI2P48788 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC17.9■□□□□ 0.46
TNNI2P48788 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNNI2P48788 MIR4722-201ENST00000578292 60 ntBASIC17.9■□□□□ 0.46
TNNI2P48788 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC17.9■□□□□ 0.46
TNNI2P48788 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNNI2P48788 AC128714.1-201ENST00000637035 887 ntBASIC17.9■□□□□ 0.46
TNNI2P48788 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNNI2P48788 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
TNNI2P48788 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNNI2P48788 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
TNNI2P48788 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TNNI2P48788 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNNI2P48788 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TNNI2P48788 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNNI2P48788 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.9■□□□□ 0.46
TNNI2P48788 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TNNI2P48788 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms