Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
CLCN1P35523 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCN1P35523 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCN1P35523 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.34■□□□□ 0.37
CLCN1P35523 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCN1P35523 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCN1P35523 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CLCN1P35523 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.34■□□□□ 0.37
CLCN1P35523 AL645939.2-201ENST00000427340 991 ntBASIC17.34■□□□□ 0.37
CLCN1P35523 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.34■□□□□ 0.37
CLCN1P35523 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.34■□□□□ 0.37
CLCN1P35523 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.34■□□□□ 0.37
CLCN1P35523 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CLCN1P35523 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.34■□□□□ 0.37
CLCN1P35523 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC17.34■□□□□ 0.37
CLCN1P35523 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CLCN1P35523 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCN1P35523 AC079140.1-201ENST00000508039 487 ntBASIC17.34■□□□□ 0.37
CLCN1P35523 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCN1P35523 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.34■□□□□ 0.37
CLCN1P35523 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.34■□□□□ 0.37
CLCN1P35523 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CLCN1P35523 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.34■□□□□ 0.37
CLCN1P35523 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.34■□□□□ 0.37
CLCN1P35523 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CLCN1P35523 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.34■□□□□ 0.37
CLCN1P35523 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.34■□□□□ 0.37
CLCN1P35523 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCN1P35523 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.34■□□□□ 0.37
CLCN1P35523 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCN1P35523 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLCN1P35523 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCN1P35523 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCN1P35523 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCN1P35523 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCN1P35523 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCN1P35523 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCN1P35523 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCN1P35523 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC17.34■□□□□ 0.37
CLCN1P35523 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CLCN1P35523 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC17.33■□□□□ 0.37
CLCN1P35523 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC17.33■□□□□ 0.37
CLCN1P35523 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLCN1P35523 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLCN1P35523 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.33■□□□□ 0.37
CLCN1P35523 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLCN1P35523 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CLCN1P35523 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.33■□□□□ 0.37
CLCN1P35523 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.33■□□□□ 0.37
CLCN1P35523 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CLCN1P35523 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLCN1P35523 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CLCN1P35523 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLCN1P35523 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
CLCN1P35523 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CLCN1P35523 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLCN1P35523 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLCN1P35523 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CLCN1P35523 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.33■□□□□ 0.36
CLCN1P35523 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLCN1P35523 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.33■□□□□ 0.36
CLCN1P35523 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.33■□□□□ 0.36
CLCN1P35523 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.33■□□□□ 0.36
CLCN1P35523 ACTG1P14-201ENST00000446382 1122 ntBASIC17.33■□□□□ 0.36
CLCN1P35523 SPDYE11-202ENST00000450699 704 ntBASIC17.33■□□□□ 0.36
CLCN1P35523 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.33■□□□□ 0.36
CLCN1P35523 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.33■□□□□ 0.36
CLCN1P35523 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.33■□□□□ 0.36
CLCN1P35523 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.33■□□□□ 0.36
CLCN1P35523 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.33■□□□□ 0.36
CLCN1P35523 SPDYE9P-201ENST00000570642 692 ntBASIC17.33■□□□□ 0.36
CLCN1P35523 AC061975.2-201ENST00000581722 295 ntBASIC17.33■□□□□ 0.36
CLCN1P35523 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.33■□□□□ 0.36
CLCN1P35523 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.33■□□□□ 0.36
CLCN1P35523 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.33■□□□□ 0.36
CLCN1P35523 SPDYE10P-202ENST00000612005 668 ntBASIC17.33■□□□□ 0.36
CLCN1P35523 SPDYE8P-202ENST00000612377 668 ntBASIC17.33■□□□□ 0.36
CLCN1P35523 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLCN1P35523 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLCN1P35523 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLCN1P35523 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLCN1P35523 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLCN1P35523 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.36
CLCN1P35523 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLCN1P35523 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLCN1P35523 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC17.33■□□□□ 0.36
CLCN1P35523 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLCN1P35523 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
CLCN1P35523 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLCN1P35523 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLCN1P35523 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC17.32■□□□□ 0.36
CLCN1P35523 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLCN1P35523 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.32■□□□□ 0.36
CLCN1P35523 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
CLCN1P35523 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC17.32■□□□□ 0.36
CLCN1P35523 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
CLCN1P35523 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CLCN1P35523 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.32■□□□□ 0.36
CLCN1P35523 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLCN1P35523 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms