Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.04■□□□□ 0.16
CHRNA3P32297 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.04■□□□□ 0.16
CHRNA3P32297 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.04■□□□□ 0.16
CHRNA3P32297 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CHRNA3P32297 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CHRNA3P32297 AL596325.1-201ENST00000563991 1082 ntBASIC16.04■□□□□ 0.16
CHRNA3P32297 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.04■□□□□ 0.16
CHRNA3P32297 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.04■□□□□ 0.16
CHRNA3P32297 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHRNA3P32297 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHRNA3P32297 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CHRNA3P32297 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHRNA3P32297 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHRNA3P32297 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CHRNA3P32297 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.04■□□□□ 0.16
CHRNA3P32297 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHRNA3P32297 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHRNA3P32297 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CHRNA3P32297 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CHRNA3P32297 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHRNA3P32297 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.03■□□□□ 0.16
CHRNA3P32297 AC018529.2-202ENST00000611482 3087 ntBASIC16.03■□□□□ 0.16
CHRNA3P32297 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
CHRNA3P32297 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHRNA3P32297 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHRNA3P32297 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHRNA3P32297 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHRNA3P32297 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.03■□□□□ 0.16
CHRNA3P32297 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHRNA3P32297 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC16.03■□□□□ 0.16
CHRNA3P32297 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.03■□□□□ 0.16
CHRNA3P32297 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHRNA3P32297 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHRNA3P32297 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.03■□□□□ 0.16
CHRNA3P32297 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHRNA3P32297 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHRNA3P32297 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.03■□□□□ 0.16
CHRNA3P32297 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHRNA3P32297 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
CHRNA3P32297 AL133267.1-201ENST00000398220 340 ntBASIC16.03■□□□□ 0.16
CHRNA3P32297 AC104457.1-201ENST00000401024 814 ntBASIC16.03■□□□□ 0.16
CHRNA3P32297 AC074338.1-201ENST00000416825 156 ntBASIC16.03■□□□□ 0.16
CHRNA3P32297 AC005034.1-201ENST00000426657 489 ntBASIC16.03■□□□□ 0.16
CHRNA3P32297 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.03■□□□□ 0.16
CHRNA3P32297 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.03■□□□□ 0.16
CHRNA3P32297 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.03■□□□□ 0.16
CHRNA3P32297 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.03■□□□□ 0.16
CHRNA3P32297 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.03■□□□□ 0.16
CHRNA3P32297 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.03■□□□□ 0.16
CHRNA3P32297 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.03■□□□□ 0.16
CHRNA3P32297 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.03■□□□□ 0.16
CHRNA3P32297 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.03■□□□□ 0.16
CHRNA3P32297 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.03■□□□□ 0.16
CHRNA3P32297 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.03■□□□□ 0.16
CHRNA3P32297 AL035252.4-201ENST00000624174 288 ntBASIC16.03■□□□□ 0.16
CHRNA3P32297 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.03■□□□□ 0.16
CHRNA3P32297 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHRNA3P32297 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHRNA3P32297 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHRNA3P32297 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC16.03■□□□□ 0.16
CHRNA3P32297 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHRNA3P32297 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CHRNA3P32297 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHRNA3P32297 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CHRNA3P32297 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHRNA3P32297 AC018442.1-201ENST00000421439 2061 ntBASIC16.03■□□□□ 0.16
CHRNA3P32297 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.02■□□□□ 0.16
CHRNA3P32297 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC16.02■□□□□ 0.16
CHRNA3P32297 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHRNA3P32297 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.02■□□□□ 0.16
CHRNA3P32297 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHRNA3P32297 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CHRNA3P32297 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC16.02■□□□□ 0.16
CHRNA3P32297 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHRNA3P32297 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CHRNA3P32297 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHRNA3P32297 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CHRNA3P32297 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CHRNA3P32297 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CHRNA3P32297 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16.02■□□□□ 0.16
CHRNA3P32297 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC16.02■□□□□ 0.16
CHRNA3P32297 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHRNA3P32297 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.02■□□□□ 0.16
CHRNA3P32297 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.02■□□□□ 0.16
CHRNA3P32297 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.02■□□□□ 0.16
CHRNA3P32297 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.02■□□□□ 0.16
CHRNA3P32297 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.02■□□□□ 0.16
CHRNA3P32297 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.02■□□□□ 0.16
CHRNA3P32297 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.02■□□□□ 0.16
CHRNA3P32297 RPL13P2-201ENST00000440687 659 ntBASIC16.02■□□□□ 0.16
CHRNA3P32297 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.02■□□□□ 0.16
CHRNA3P32297 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.02■□□□□ 0.16
CHRNA3P32297 AC239800.4-201ENST00000603712 296 ntBASIC16.02■□□□□ 0.16
CHRNA3P32297 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CHRNA3P32297 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHRNA3P32297 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CHRNA3P32297 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CHRNA3P32297 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.15
CHRNA3P32297 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.15
CHRNA3P32297 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms