Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
CCL1P22362 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCL1P22362 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.03□□□□□ -0.32
CCL1P22362 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCL1P22362 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCL1P22362 SPDYE19P-201ENST00000338590 713 ntBASIC13.03□□□□□ -0.32
CCL1P22362 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCL1P22362 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.03□□□□□ -0.32
CCL1P22362 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CCL1P22362 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.03□□□□□ -0.32
CCL1P22362 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.03□□□□□ -0.32
CCL1P22362 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCL1P22362 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CCL1P22362 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.03□□□□□ -0.32
CCL1P22362 AC134915.1-201ENST00000426461 574 ntBASIC13.03□□□□□ -0.32
CCL1P22362 AL442647.2-201ENST00000429864 857 ntBASIC13.03□□□□□ -0.32
CCL1P22362 BASP1P1-201ENST00000430708 665 ntBASIC13.03□□□□□ -0.32
CCL1P22362 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCL1P22362 AC114812.1-204ENST00000449669 728 ntBASIC13.03□□□□□ -0.32
CCL1P22362 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.03□□□□□ -0.32
CCL1P22362 AC022616.1-201ENST00000518688 554 ntBASIC13.03□□□□□ -0.32
CCL1P22362 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.03□□□□□ -0.32
CCL1P22362 AC055876.2-201ENST00000531834 546 ntBASIC13.03□□□□□ -0.32
CCL1P22362 AC124283.3-201ENST00000570869 594 ntBASIC13.03□□□□□ -0.32
CCL1P22362 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.03□□□□□ -0.32
CCL1P22362 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.03□□□□□ -0.32
CCL1P22362 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.03□□□□□ -0.32
CCL1P22362 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCL1P22362 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.03□□□□□ -0.32
CCL1P22362 AC093512.1-201ENST00000617969 520 ntBASIC13.03□□□□□ -0.32
CCL1P22362 AC139530.3-201ENST00000620344 690 ntBASIC13.03□□□□□ -0.32
CCL1P22362 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.03□□□□□ -0.32
CCL1P22362 AC092135.3-201ENST00000624151 1846 ntBASIC13.03□□□□□ -0.32
CCL1P22362 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.03□□□□□ -0.32
CCL1P22362 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.03□□□□□ -0.32
CCL1P22362 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCL1P22362 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
CCL1P22362 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCL1P22362 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCL1P22362 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CCL1P22362 KRT8P22-201ENST00000562317 1415 ntBASIC13.03□□□□□ -0.32
CCL1P22362 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCL1P22362 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.03□□□□□ -0.32
CCL1P22362 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCL1P22362 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCL1P22362 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.03□□□□□ -0.32
CCL1P22362 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
CCL1P22362 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCL1P22362 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CCL1P22362 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCL1P22362 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
CCL1P22362 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CCL1P22362 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
CCL1P22362 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CCL1P22362 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CCL1P22362 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CCL1P22362 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.02□□□□□ -0.32
CCL1P22362 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CCL1P22362 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CCL1P22362 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CCL1P22362 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
CCL1P22362 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.33
CCL1P22362 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCL1P22362 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.02□□□□□ -0.33
CCL1P22362 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.02□□□□□ -0.33
CCL1P22362 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCL1P22362 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.02□□□□□ -0.33
CCL1P22362 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.02□□□□□ -0.33
CCL1P22362 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCL1P22362 C1QBPP1-201ENST00000400117 770 ntBASIC13.02□□□□□ -0.33
CCL1P22362 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CCL1P22362 TLE1P1-201ENST00000422965 589 ntBASIC13.02□□□□□ -0.33
CCL1P22362 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.02□□□□□ -0.33
CCL1P22362 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCL1P22362 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.02□□□□□ -0.33
CCL1P22362 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.02□□□□□ -0.33
CCL1P22362 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.02□□□□□ -0.33
CCL1P22362 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.02□□□□□ -0.33
CCL1P22362 SPDYE22P-201ENST00000582158 798 ntBASIC13.02□□□□□ -0.33
CCL1P22362 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.02□□□□□ -0.33
CCL1P22362 AC092364.2-202ENST00000597012 1073 ntBASIC13.02□□□□□ -0.33
CCL1P22362 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.02□□□□□ -0.33
CCL1P22362 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.02□□□□□ -0.33
CCL1P22362 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.02□□□□□ -0.33
CCL1P22362 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.33
CCL1P22362 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.02□□□□□ -0.33
CCL1P22362 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCL1P22362 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCL1P22362 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CCL1P22362 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.02□□□□□ -0.33
CCL1P22362 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CCL1P22362 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
CCL1P22362 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCL1P22362 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCL1P22362 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.02□□□□□ -0.33
CCL1P22362 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CCL1P22362 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
CCL1P22362 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCL1P22362 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CCL1P22362 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 165.2 ms