Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.84■□□□□ 0.45
TOP1P11387 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TOP1P11387 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
TOP1P11387 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TOP1P11387 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.83■□□□□ 0.45
TOP1P11387 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
TOP1P11387 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TOP1P11387 TPO-203ENST00000346956 2923 ntTSL 5 BASIC17.83■□□□□ 0.45
TOP1P11387 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TOP1P11387 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
TOP1P11387 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TOP1P11387 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.83■□□□□ 0.45
TOP1P11387 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TOP1P11387 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TOP1P11387 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.83■□□□□ 0.44
TOP1P11387 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TOP1P11387 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.83■□□□□ 0.44
TOP1P11387 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
TOP1P11387 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.83■□□□□ 0.44
TOP1P11387 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
TOP1P11387 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.83■□□□□ 0.44
TOP1P11387 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.83■□□□□ 0.44
TOP1P11387 FO681548.1-201ENST00000455617 1132 ntBASIC17.83■□□□□ 0.44
TOP1P11387 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TOP1P11387 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.83■□□□□ 0.44
TOP1P11387 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.83■□□□□ 0.44
TOP1P11387 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17.83■□□□□ 0.44
TOP1P11387 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.83■□□□□ 0.44
TOP1P11387 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.83■□□□□ 0.44
TOP1P11387 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.83■□□□□ 0.44
TOP1P11387 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.83■□□□□ 0.44
TOP1P11387 RHOXF1P1-202ENST00000635473 501 ntBASIC17.83■□□□□ 0.44
TOP1P11387 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
TOP1P11387 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TOP1P11387 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
TOP1P11387 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TOP1P11387 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TOP1P11387 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TOP1P11387 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TOP1P11387 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.83■□□□□ 0.44
TOP1P11387 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC17.83■□□□□ 0.44
TOP1P11387 REXO1L5P-201ENST00000622260 2098 ntBASIC17.83■□□□□ 0.44
TOP1P11387 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TOP1P11387 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.83■□□□□ 0.44
TOP1P11387 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TOP1P11387 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TOP1P11387 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.82■□□□□ 0.44
TOP1P11387 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TOP1P11387 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TOP1P11387 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.82■□□□□ 0.44
TOP1P11387 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
TOP1P11387 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TOP1P11387 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
TOP1P11387 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC17.82■□□□□ 0.44
TOP1P11387 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
TOP1P11387 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TOP1P11387 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TOP1P11387 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TOP1P11387 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TOP1P11387 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TOP1P11387 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TOP1P11387 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
TOP1P11387 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TOP1P11387 AL161772.1-201ENST00000610494 4412 ntBASIC17.82■□□□□ 0.44
TOP1P11387 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TOP1P11387 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TOP1P11387 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
TOP1P11387 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TOP1P11387 AC099336.1-201ENST00000417053 1171 ntBASIC17.82■□□□□ 0.44
TOP1P11387 FAM197Y7-201ENST00000432892 766 ntBASIC17.82■□□□□ 0.44
TOP1P11387 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TOP1P11387 RPS2P32-201ENST00000439199 892 ntBASIC17.82■□□□□ 0.44
TOP1P11387 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.82■□□□□ 0.44
TOP1P11387 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
TOP1P11387 RN7SL48P-201ENST00000579283 293 ntBASIC17.82■□□□□ 0.44
TOP1P11387 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.82■□□□□ 0.44
TOP1P11387 AL603764.1-201ENST00000636452 321 ntBASIC17.82■□□□□ 0.44
TOP1P11387 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.82■□□□□ 0.44
TOP1P11387 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TOP1P11387 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
TOP1P11387 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.82■□□□□ 0.44
TOP1P11387 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TOP1P11387 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17.82■□□□□ 0.44
TOP1P11387 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TOP1P11387 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TOP1P11387 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
TOP1P11387 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
TOP1P11387 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TOP1P11387 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TOP1P11387 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TOP1P11387 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TOP1P11387 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC17.81■□□□□ 0.44
TOP1P11387 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TOP1P11387 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TOP1P11387 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TOP1P11387 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TOP1P11387 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TOP1P11387 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
TOP1P11387 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TOP1P11387 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms