Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.08■□□□□ 0.32
TPM3P06753 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.08■□□□□ 0.32
TPM3P06753 SPCS2P4-201ENST00000436160 681 ntBASIC17.08■□□□□ 0.32
TPM3P06753 AL591424.1-201ENST00000442569 1213 ntBASIC17.08■□□□□ 0.32
TPM3P06753 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TPM3P06753 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TPM3P06753 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.08■□□□□ 0.32
TPM3P06753 AC243562.1-201ENST00000560672 389 ntBASIC17.08■□□□□ 0.32
TPM3P06753 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.08■□□□□ 0.32
TPM3P06753 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TPM3P06753 SLC25A6P4-201ENST00000586535 553 ntBASIC17.08■□□□□ 0.32
TPM3P06753 AC026120.1-201ENST00000611536 926 ntBASIC17.08■□□□□ 0.32
TPM3P06753 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TPM3P06753 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TPM3P06753 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TPM3P06753 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
TPM3P06753 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TPM3P06753 SF1-209ENST00000433274 2317 ntTSL 2 BASIC17.08■□□□□ 0.32
TPM3P06753 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC17.08■□□□□ 0.32
TPM3P06753 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TPM3P06753 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC17.08■□□□□ 0.32
TPM3P06753 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TPM3P06753 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TPM3P06753 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.07■□□□□ 0.32
TPM3P06753 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.07■□□□□ 0.32
TPM3P06753 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPM3P06753 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
TPM3P06753 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.07■□□□□ 0.32
TPM3P06753 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPM3P06753 AC015818.8-201ENST00000587907 1519 ntBASIC17.07■□□□□ 0.32
TPM3P06753 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC17.07■□□□□ 0.32
TPM3P06753 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TPM3P06753 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPM3P06753 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPM3P06753 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC17.07■□□□□ 0.32
TPM3P06753 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TPM3P06753 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TPM3P06753 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPM3P06753 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TPM3P06753 AL122018.1-201ENST00000446607 2310 ntBASIC17.07■□□□□ 0.32
TPM3P06753 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
TPM3P06753 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPM3P06753 HLA-A-201ENST00000376802 1334 ntBASIC17.07■□□□□ 0.32
TPM3P06753 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPM3P06753 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
TPM3P06753 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TPM3P06753 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.07■□□□□ 0.32
TPM3P06753 AL450487.1-201ENST00000426799 995 ntBASIC17.07■□□□□ 0.32
TPM3P06753 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.07■□□□□ 0.32
TPM3P06753 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPM3P06753 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TPM3P06753 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC17.07■□□□□ 0.32
TPM3P06753 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPM3P06753 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TPM3P06753 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPM3P06753 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TPM3P06753 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPM3P06753 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPM3P06753 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC17.07■□□□□ 0.32
TPM3P06753 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TPM3P06753 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TPM3P06753 PPT1-213ENST00000641319 2388 ntBASIC17.07■□□□□ 0.32
TPM3P06753 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPM3P06753 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TPM3P06753 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPM3P06753 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPM3P06753 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
TPM3P06753 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPM3P06753 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPM3P06753 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPM3P06753 UXT-AS1-201ENST00000590504 1525 ntBASIC17.06■□□□□ 0.32
TPM3P06753 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TPM3P06753 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TPM3P06753 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TPM3P06753 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TPM3P06753 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPM3P06753 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC17.06■□□□□ 0.32
TPM3P06753 ZNF259P1-201ENST00000407656 1365 ntBASIC17.06■□□□□ 0.32
TPM3P06753 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPM3P06753 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC17.06■□□□□ 0.32
TPM3P06753 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TPM3P06753 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPM3P06753 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPM3P06753 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TPM3P06753 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TPM3P06753 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TPM3P06753 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.06■□□□□ 0.32
TPM3P06753 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.06■□□□□ 0.32
TPM3P06753 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.06■□□□□ 0.32
TPM3P06753 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.06■□□□□ 0.32
TPM3P06753 RPL13AP23-201ENST00000480739 586 ntBASIC17.06■□□□□ 0.32
TPM3P06753 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TPM3P06753 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.06■□□□□ 0.32
TPM3P06753 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.06■□□□□ 0.32
TPM3P06753 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TPM3P06753 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.06■□□□□ 0.32
TPM3P06753 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.06■□□□□ 0.32
TPM3P06753 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.06■□□□□ 0.32
TPM3P06753 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.06■□□□□ 0.32
TPM3P06753 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms