Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VTNP04004 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.53■□□□□ 0.24
VTNP04004 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
VTNP04004 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
VTNP04004 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.52■□□□□ 0.24
VTNP04004 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.52■□□□□ 0.24
VTNP04004 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
VTNP04004 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
VTNP04004 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
VTNP04004 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VTNP04004 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VTNP04004 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VTNP04004 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
VTNP04004 RN7SKP230-201ENST00000365642 335 ntBASIC16.52■□□□□ 0.24
VTNP04004 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VTNP04004 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC16.52■□□□□ 0.24
VTNP04004 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
VTNP04004 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
VTNP04004 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
VTNP04004 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
VTNP04004 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC16.52■□□□□ 0.24
VTNP04004 CALR4P-201ENST00000431943 946 ntBASIC16.52■□□□□ 0.24
VTNP04004 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC16.52■□□□□ 0.24
VTNP04004 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC16.52■□□□□ 0.24
VTNP04004 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC16.52■□□□□ 0.24
VTNP04004 AC044849.1-201ENST00000519737 1188 ntBASIC16.52■□□□□ 0.24
VTNP04004 AC020914.3-201ENST00000594712 304 ntBASIC16.52■□□□□ 0.24
VTNP04004 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
VTNP04004 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC16.52■□□□□ 0.24
VTNP04004 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
VTNP04004 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.52■□□□□ 0.24
VTNP04004 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
VTNP04004 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
VTNP04004 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
VTNP04004 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.52■□□□□ 0.23
VTNP04004 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
VTNP04004 AC023090.2-201ENST00000625182 2110 ntBASIC16.52■□□□□ 0.23
VTNP04004 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.52■□□□□ 0.23
VTNP04004 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.52■□□□□ 0.23
VTNP04004 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
VTNP04004 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC16.52■□□□□ 0.23
VTNP04004 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
VTNP04004 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
VTNP04004 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
VTNP04004 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.51■□□□□ 0.23
VTNP04004 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VTNP04004 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VTNP04004 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VTNP04004 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.51■□□□□ 0.23
VTNP04004 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.51■□□□□ 0.23
VTNP04004 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.51■□□□□ 0.23
VTNP04004 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VTNP04004 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
VTNP04004 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VTNP04004 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
VTNP04004 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC16.51■□□□□ 0.23
VTNP04004 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.51■□□□□ 0.23
VTNP04004 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
VTNP04004 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.51■□□□□ 0.23
VTNP04004 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VTNP04004 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC16.51■□□□□ 0.23
VTNP04004 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
VTNP04004 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC16.51■□□□□ 0.23
VTNP04004 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.51■□□□□ 0.23
VTNP04004 NKAIN1P1-201ENST00000435754 582 ntBASIC16.51■□□□□ 0.23
VTNP04004 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC16.51■□□□□ 0.23
VTNP04004 ATP6V0CP2-201ENST00000469409 207 ntBASIC16.51■□□□□ 0.23
VTNP04004 HIST2H2BC-201ENST00000498492 580 ntBASIC16.51■□□□□ 0.23
VTNP04004 SCARNA20.5-201ENST00000516991 142 ntBASIC16.51■□□□□ 0.23
VTNP04004 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC16.51■□□□□ 0.23
VTNP04004 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.51■□□□□ 0.23
VTNP04004 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC16.51■□□□□ 0.23
VTNP04004 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC16.51■□□□□ 0.23
VTNP04004 FER1L4-210ENST00000615531 5998 ntBASIC16.51■□□□□ 0.23
VTNP04004 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VTNP04004 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.51■□□□□ 0.23
VTNP04004 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
VTNP04004 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VTNP04004 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.51■□□□□ 0.23
VTNP04004 AC138035.3-201ENST00000622706 2791 ntBASIC16.51■□□□□ 0.23
VTNP04004 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
VTNP04004 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.51■□□□□ 0.23
VTNP04004 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
VTNP04004 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
VTNP04004 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
VTNP04004 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VTNP04004 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
VTNP04004 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VTNP04004 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.51■□□□□ 0.23
VTNP04004 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
VTNP04004 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VTNP04004 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VTNP04004 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VTNP04004 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VTNP04004 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VTNP04004 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VTNP04004 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.5■□□□□ 0.23
VTNP04004 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC16.5■□□□□ 0.23
VTNP04004 AL138725.1-201ENST00000407347 1314 ntBASIC16.5■□□□□ 0.23
VTNP04004 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms