Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.42□□□□□ -0.1
SCN2BO60939 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.42□□□□□ -0.1
SCN2BO60939 SPDYE18-201ENST00000510091 1050 ntBASIC14.42□□□□□ -0.1
SCN2BO60939 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.42□□□□□ -0.1
SCN2BO60939 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCN2BO60939 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.42□□□□□ -0.1
SCN2BO60939 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.42□□□□□ -0.1
SCN2BO60939 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCN2BO60939 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.42□□□□□ -0.1
SCN2BO60939 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.42□□□□□ -0.1
SCN2BO60939 AC004840.1-201ENST00000636359 365 ntBASIC14.42□□□□□ -0.1
SCN2BO60939 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.42□□□□□ -0.1
SCN2BO60939 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCN2BO60939 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
SCN2BO60939 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SCN2BO60939 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCN2BO60939 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SCN2BO60939 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.42□□□□□ -0.1
SCN2BO60939 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCN2BO60939 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.42□□□□□ -0.1
SCN2BO60939 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCN2BO60939 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SCN2BO60939 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SCN2BO60939 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SCN2BO60939 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
SCN2BO60939 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCN2BO60939 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.41□□□□□ -0.1
SCN2BO60939 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SCN2BO60939 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.41□□□□□ -0.1
SCN2BO60939 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.41□□□□□ -0.1
SCN2BO60939 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCN2BO60939 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCN2BO60939 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCN2BO60939 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SCN2BO60939 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SCN2BO60939 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCN2BO60939 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
SCN2BO60939 AC241585.1-201ENST00000433527 519 ntBASIC14.41□□□□□ -0.1
SCN2BO60939 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCN2BO60939 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SCN2BO60939 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.41□□□□□ -0.1
SCN2BO60939 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.41□□□□□ -0.1
SCN2BO60939 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.41□□□□□ -0.1
SCN2BO60939 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.41□□□□□ -0.1
SCN2BO60939 SRD5A3P1-201ENST00000603021 949 ntBASIC14.41□□□□□ -0.1
SCN2BO60939 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SCN2BO60939 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SCN2BO60939 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.41□□□□□ -0.1
SCN2BO60939 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SCN2BO60939 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCN2BO60939 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.41□□□□□ -0.1
SCN2BO60939 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCN2BO60939 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SCN2BO60939 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.41□□□□□ -0.1
SCN2BO60939 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCN2BO60939 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
SCN2BO60939 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCN2BO60939 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SCN2BO60939 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
SCN2BO60939 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SCN2BO60939 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCN2BO60939 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.41□□□□□ -0.1
SCN2BO60939 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCN2BO60939 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCN2BO60939 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.41□□□□□ -0.1
SCN2BO60939 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.41□□□□□ -0.1
SCN2BO60939 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SCN2BO60939 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SCN2BO60939 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.4□□□□□ -0.1
SCN2BO60939 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SCN2BO60939 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.4□□□□□ -0.1
SCN2BO60939 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SCN2BO60939 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.4□□□□□ -0.1
SCN2BO60939 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SCN2BO60939 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SCN2BO60939 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.4□□□□□ -0.1
SCN2BO60939 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.4□□□□□ -0.1
SCN2BO60939 AL353779.1-201ENST00000434793 351 ntBASIC14.4□□□□□ -0.1
SCN2BO60939 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.4□□□□□ -0.1
SCN2BO60939 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.4□□□□□ -0.1
SCN2BO60939 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
SCN2BO60939 DUX4L27-201ENST00000554796 1261 ntBASIC14.4□□□□□ -0.1
SCN2BO60939 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.4□□□□□ -0.1
SCN2BO60939 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.4□□□□□ -0.1
SCN2BO60939 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.4□□□□□ -0.1
SCN2BO60939 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.4□□□□□ -0.1
SCN2BO60939 AC008738.7-201ENST00000609744 511 ntBASIC14.4□□□□□ -0.1
SCN2BO60939 AC004790.1-201ENST00000612686 536 ntBASIC14.4□□□□□ -0.1
SCN2BO60939 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.4□□□□□ -0.1
SCN2BO60939 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SCN2BO60939 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SCN2BO60939 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SCN2BO60939 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SCN2BO60939 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.4□□□□□ -0.1
SCN2BO60939 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.4□□□□□ -0.1
SCN2BO60939 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.4□□□□□ -0.1
SCN2BO60939 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SCN2BO60939 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SCN2BO60939 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SCN2BO60939 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms