Protein–RNA interactions for Protein: O60504

SORBS3, Vinexin, humanhuman

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SORBS3O60504 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SORBS3O60504 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SORBS3O60504 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
SORBS3O60504 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SORBS3O60504 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.05■□□□□ 0.32
SORBS3O60504 AL360270.3-201ENST00000609118 1348 ntBASIC17.05■□□□□ 0.32
SORBS3O60504 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SORBS3O60504 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SORBS3O60504 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC17.05■□□□□ 0.32
SORBS3O60504 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SORBS3O60504 RPS3-201ENST00000278572 907 ntTSL 3 BASIC17.05■□□□□ 0.32
SORBS3O60504 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SORBS3O60504 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SORBS3O60504 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SORBS3O60504 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SORBS3O60504 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SORBS3O60504 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SORBS3O60504 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC17.05■□□□□ 0.32
SORBS3O60504 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC17.05■□□□□ 0.32
SORBS3O60504 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.05■□□□□ 0.32
SORBS3O60504 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC17.05■□□□□ 0.32
SORBS3O60504 AL606495.2-201ENST00000605867 535 ntBASIC17.05■□□□□ 0.32
SORBS3O60504 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.05■□□□□ 0.32
SORBS3O60504 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
SORBS3O60504 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SORBS3O60504 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SORBS3O60504 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.05■□□□□ 0.32
SORBS3O60504 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SORBS3O60504 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SORBS3O60504 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SORBS3O60504 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.05■□□□□ 0.32
SORBS3O60504 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SORBS3O60504 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SORBS3O60504 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SORBS3O60504 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
SORBS3O60504 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SORBS3O60504 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.04■□□□□ 0.32
SORBS3O60504 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.04■□□□□ 0.32
SORBS3O60504 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SORBS3O60504 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SORBS3O60504 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.04■□□□□ 0.32
SORBS3O60504 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SORBS3O60504 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SORBS3O60504 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SORBS3O60504 AC023024.2-201ENST00000623561 1993 ntBASIC17.04■□□□□ 0.32
SORBS3O60504 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SORBS3O60504 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SORBS3O60504 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.04■□□□□ 0.32
SORBS3O60504 AC126177.1-201ENST00000547829 2218 ntBASIC17.04■□□□□ 0.32
SORBS3O60504 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SORBS3O60504 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.04■□□□□ 0.32
SORBS3O60504 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SORBS3O60504 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SORBS3O60504 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SORBS3O60504 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SORBS3O60504 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SORBS3O60504 INE2-201ENST00000630399 1874 ntBASIC17.04■□□□□ 0.32
SORBS3O60504 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SORBS3O60504 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SORBS3O60504 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SORBS3O60504 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
SORBS3O60504 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SORBS3O60504 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC17.04■□□□□ 0.32
SORBS3O60504 CD8B2-202ENST00000417670 633 ntBASIC17.04■□□□□ 0.32
SORBS3O60504 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC17.04■□□□□ 0.32
SORBS3O60504 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.04■□□□□ 0.32
SORBS3O60504 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.04■□□□□ 0.32
SORBS3O60504 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC17.04■□□□□ 0.32
SORBS3O60504 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.04■□□□□ 0.32
SORBS3O60504 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SORBS3O60504 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
SORBS3O60504 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC17.04■□□□□ 0.32
SORBS3O60504 MIR4683-201ENST00000579659 81 ntBASIC17.04■□□□□ 0.32
SORBS3O60504 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.04■□□□□ 0.32
SORBS3O60504 AL008638.5-201ENST00000623814 1298 ntBASIC17.04■□□□□ 0.32
SORBS3O60504 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC17.04■□□□□ 0.32
SORBS3O60504 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SORBS3O60504 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17.04■□□□□ 0.32
SORBS3O60504 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SORBS3O60504 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SORBS3O60504 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SORBS3O60504 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SORBS3O60504 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
SORBS3O60504 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.04■□□□□ 0.32
SORBS3O60504 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SORBS3O60504 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SORBS3O60504 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SORBS3O60504 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SORBS3O60504 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SORBS3O60504 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SORBS3O60504 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SORBS3O60504 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SORBS3O60504 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SORBS3O60504 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SORBS3O60504 GRN-222ENST00000639447 1314 ntTSL 2 BASIC17.03■□□□□ 0.32
SORBS3O60504 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SORBS3O60504 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SORBS3O60504 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SORBS3O60504 SSR4P1-203ENST00000599569 2260 ntBASIC17.03■□□□□ 0.32
SORBS3O60504 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms