Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.55□□□□□ -0.08
PRICKLE3O43900 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.55□□□□□ -0.08
PRICKLE3O43900 AL606495.2-201ENST00000605867 535 ntBASIC14.55□□□□□ -0.08
PRICKLE3O43900 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.55□□□□□ -0.08
PRICKLE3O43900 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.55□□□□□ -0.08
PRICKLE3O43900 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PRICKLE3O43900 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PRICKLE3O43900 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.55□□□□□ -0.08
PRICKLE3O43900 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PRICKLE3O43900 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PRICKLE3O43900 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PRICKLE3O43900 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PRICKLE3O43900 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.54□□□□□ -0.08
PRICKLE3O43900 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PRICKLE3O43900 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PRICKLE3O43900 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PRICKLE3O43900 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PRICKLE3O43900 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PRICKLE3O43900 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PRICKLE3O43900 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.54□□□□□ -0.08
PRICKLE3O43900 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.54□□□□□ -0.08
PRICKLE3O43900 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PRICKLE3O43900 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
PRICKLE3O43900 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PRICKLE3O43900 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
PRICKLE3O43900 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PRICKLE3O43900 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PRICKLE3O43900 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PRICKLE3O43900 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.54□□□□□ -0.08
PRICKLE3O43900 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PRICKLE3O43900 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.54□□□□□ -0.08
PRICKLE3O43900 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
PRICKLE3O43900 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.54□□□□□ -0.08
PRICKLE3O43900 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.54□□□□□ -0.08
PRICKLE3O43900 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.54□□□□□ -0.08
PRICKLE3O43900 AL590640.2-201ENST00000457038 527 ntBASIC14.54□□□□□ -0.08
PRICKLE3O43900 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.54□□□□□ -0.08
PRICKLE3O43900 AC104989.1-201ENST00000519711 778 ntBASIC14.54□□□□□ -0.08
PRICKLE3O43900 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PRICKLE3O43900 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.54□□□□□ -0.08
PRICKLE3O43900 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.54□□□□□ -0.08
PRICKLE3O43900 RHOXF1P1-202ENST00000635473 501 ntBASIC14.54□□□□□ -0.08
PRICKLE3O43900 AC006453.4-201ENST00000636949 1252 ntBASIC14.54□□□□□ -0.08
PRICKLE3O43900 CLUHP2-201ENST00000426660 1303 ntBASIC14.54□□□□□ -0.08
PRICKLE3O43900 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PRICKLE3O43900 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.54□□□□□ -0.08
PRICKLE3O43900 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.54□□□□□ -0.08
PRICKLE3O43900 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.54□□□□□ -0.08
PRICKLE3O43900 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PRICKLE3O43900 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PRICKLE3O43900 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PRICKLE3O43900 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
PRICKLE3O43900 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PRICKLE3O43900 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
PRICKLE3O43900 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PRICKLE3O43900 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
PRICKLE3O43900 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PRICKLE3O43900 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PRICKLE3O43900 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
PRICKLE3O43900 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PRICKLE3O43900 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
PRICKLE3O43900 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PRICKLE3O43900 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PRICKLE3O43900 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PRICKLE3O43900 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PRICKLE3O43900 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.53□□□□□ -0.08
PRICKLE3O43900 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRICKLE3O43900 AL136379.1-201ENST00000623471 2642 ntBASIC14.53□□□□□ -0.08
PRICKLE3O43900 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRICKLE3O43900 AJ011931.1-201ENST00000618749 2492 ntBASIC14.53□□□□□ -0.08
PRICKLE3O43900 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRICKLE3O43900 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.53□□□□□ -0.08
PRICKLE3O43900 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRICKLE3O43900 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRICKLE3O43900 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.53□□□□□ -0.08
PRICKLE3O43900 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRICKLE3O43900 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRICKLE3O43900 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PRICKLE3O43900 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRICKLE3O43900 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PRICKLE3O43900 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.53□□□□□ -0.08
PRICKLE3O43900 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.53□□□□□ -0.08
PRICKLE3O43900 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PRICKLE3O43900 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRICKLE3O43900 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
PRICKLE3O43900 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRICKLE3O43900 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PRICKLE3O43900 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PRICKLE3O43900 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.53□□□□□ -0.08
PRICKLE3O43900 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRICKLE3O43900 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.53□□□□□ -0.08
PRICKLE3O43900 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PRICKLE3O43900 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.53□□□□□ -0.08
PRICKLE3O43900 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PRICKLE3O43900 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.53□□□□□ -0.08
PRICKLE3O43900 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PRICKLE3O43900 ECM1P1-201ENST00000604092 1279 ntBASIC14.53□□□□□ -0.08
PRICKLE3O43900 AC017083.2-201ENST00000608069 979 ntBASIC14.53□□□□□ -0.08
PRICKLE3O43900 AC138466.3-201ENST00000619983 221 ntBASIC14.53□□□□□ -0.08
PRICKLE3O43900 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms