Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
SNAI2O43623 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SNAI2O43623 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
SNAI2O43623 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
SNAI2O43623 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
SNAI2O43623 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC11.46□□□□□ -0.58
SNAI2O43623 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
SNAI2O43623 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC11.46□□□□□ -0.58
SNAI2O43623 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC11.46□□□□□ -0.58
SNAI2O43623 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC11.46□□□□□ -0.58
SNAI2O43623 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC11.46□□□□□ -0.58
SNAI2O43623 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SNAI2O43623 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SNAI2O43623 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
SNAI2O43623 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SNAI2O43623 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC11.45□□□□□ -0.58
SNAI2O43623 MPI-203ENST00000535694 1523 ntTSL 2 BASIC11.45□□□□□ -0.58
SNAI2O43623 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
SNAI2O43623 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SNAI2O43623 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SNAI2O43623 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SNAI2O43623 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC11.45□□□□□ -0.58
SNAI2O43623 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SNAI2O43623 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SNAI2O43623 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
SNAI2O43623 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC11.45□□□□□ -0.58
SNAI2O43623 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
SNAI2O43623 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SNAI2O43623 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
SNAI2O43623 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SNAI2O43623 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SNAI2O43623 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
SNAI2O43623 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SNAI2O43623 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC11.45□□□□□ -0.58
SNAI2O43623 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC11.45□□□□□ -0.58
SNAI2O43623 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC11.45□□□□□ -0.58
SNAI2O43623 AKAP8P1-201ENST00000434743 1349 ntBASIC11.45□□□□□ -0.58
SNAI2O43623 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SNAI2O43623 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC11.45□□□□□ -0.58
SNAI2O43623 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC11.45□□□□□ -0.58
SNAI2O43623 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC11.45□□□□□ -0.58
SNAI2O43623 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SNAI2O43623 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
SNAI2O43623 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC11.45□□□□□ -0.58
SNAI2O43623 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SNAI2O43623 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SNAI2O43623 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SNAI2O43623 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC11.45□□□□□ -0.58
SNAI2O43623 CBR1-202ENST00000399191 838 ntTSL 3 BASIC11.45□□□□□ -0.58
SNAI2O43623 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SNAI2O43623 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC11.45□□□□□ -0.58
SNAI2O43623 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC11.45□□□□□ -0.58
SNAI2O43623 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC11.45□□□□□ -0.58
SNAI2O43623 IGHV3-22-201ENST00000520721 359 ntBASIC11.45□□□□□ -0.58
SNAI2O43623 AC112191.1-201ENST00000523689 701 ntBASIC11.45□□□□□ -0.58
SNAI2O43623 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC11.45□□□□□ -0.58
SNAI2O43623 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC11.45□□□□□ -0.58
SNAI2O43623 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SNAI2O43623 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC11.45□□□□□ -0.58
SNAI2O43623 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC11.45□□□□□ -0.58
SNAI2O43623 AC099522.2-201ENST00000607001 744 ntBASIC11.45□□□□□ -0.58
SNAI2O43623 AC026979.3-201ENST00000607315 403 ntBASIC11.45□□□□□ -0.58
SNAI2O43623 AC008267.7-201ENST00000624570 1194 ntBASIC11.45□□□□□ -0.58
SNAI2O43623 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
SNAI2O43623 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC11.45□□□□□ -0.58
SNAI2O43623 AC073869.1-201ENST00000415574 2762 ntBASIC11.45□□□□□ -0.58
SNAI2O43623 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
SNAI2O43623 AC136759.1-202ENST00000530858 2194 ntBASIC11.45□□□□□ -0.58
SNAI2O43623 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC11.45□□□□□ -0.58
SNAI2O43623 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SNAI2O43623 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SNAI2O43623 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SNAI2O43623 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SNAI2O43623 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC11.45□□□□□ -0.58
SNAI2O43623 AC084364.1-201ENST00000551967 1556 ntBASIC11.45□□□□□ -0.58
SNAI2O43623 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SNAI2O43623 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC11.45□□□□□ -0.58
SNAI2O43623 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
SNAI2O43623 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SNAI2O43623 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SNAI2O43623 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
SNAI2O43623 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC11.45□□□□□ -0.58
SNAI2O43623 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SNAI2O43623 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
SNAI2O43623 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SNAI2O43623 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC11.45□□□□□ -0.58
SNAI2O43623 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SNAI2O43623 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SNAI2O43623 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
SNAI2O43623 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SNAI2O43623 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SNAI2O43623 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SNAI2O43623 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SNAI2O43623 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC11.44□□□□□ -0.58
SNAI2O43623 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SNAI2O43623 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC11.44□□□□□ -0.58
SNAI2O43623 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
SNAI2O43623 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SNAI2O43623 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC11.44□□□□□ -0.58
SNAI2O43623 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms