Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.26■□□□□ 0.03
SMAD6O43541 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMAD6O43541 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SMAD6O43541 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMAD6O43541 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMAD6O43541 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SMAD6O43541 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SMAD6O43541 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMAD6O43541 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMAD6O43541 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SMAD6O43541 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SMAD6O43541 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.26■□□□□ 0.03
SMAD6O43541 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMAD6O43541 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SMAD6O43541 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.26■□□□□ 0.03
SMAD6O43541 HOMER2P2-201ENST00000451621 847 ntBASIC15.26■□□□□ 0.03
SMAD6O43541 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SMAD6O43541 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.26■□□□□ 0.03
SMAD6O43541 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.26■□□□□ 0.03
SMAD6O43541 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.26■□□□□ 0.03
SMAD6O43541 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.26■□□□□ 0.03
SMAD6O43541 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.26■□□□□ 0.03
SMAD6O43541 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.26■□□□□ 0.03
SMAD6O43541 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.26■□□□□ 0.03
SMAD6O43541 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.26■□□□□ 0.03
SMAD6O43541 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.26■□□□□ 0.03
SMAD6O43541 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMAD6O43541 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMAD6O43541 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.26■□□□□ 0.03
SMAD6O43541 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SMAD6O43541 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
SMAD6O43541 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
SMAD6O43541 AC009093.2-202ENST00000620513 2079 ntBASIC15.26■□□□□ 0.03
SMAD6O43541 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMAD6O43541 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.26■□□□□ 0.03
SMAD6O43541 KRT8P4-201ENST00000509735 1454 ntBASIC15.26■□□□□ 0.03
SMAD6O43541 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.26■□□□□ 0.03
SMAD6O43541 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SMAD6O43541 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMAD6O43541 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
SMAD6O43541 DBET-201ENST00000630918 3363 ntBASIC15.25■□□□□ 0.03
SMAD6O43541 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMAD6O43541 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMAD6O43541 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMAD6O43541 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.25■□□□□ 0.03
SMAD6O43541 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMAD6O43541 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.25■□□□□ 0.03
SMAD6O43541 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMAD6O43541 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMAD6O43541 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMAD6O43541 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMAD6O43541 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SMAD6O43541 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.25■□□□□ 0.03
SMAD6O43541 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMAD6O43541 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMAD6O43541 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
SMAD6O43541 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMAD6O43541 MIR326-201ENST00000362220 95 ntBASIC15.25■□□□□ 0.03
SMAD6O43541 RN7SKP230-201ENST00000365642 335 ntBASIC15.25■□□□□ 0.03
SMAD6O43541 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.25■□□□□ 0.03
SMAD6O43541 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.25■□□□□ 0.03
SMAD6O43541 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SMAD6O43541 ACTBP11-201ENST00000436287 1126 ntBASIC15.25■□□□□ 0.03
SMAD6O43541 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.25■□□□□ 0.03
SMAD6O43541 GOLGA2P4-201ENST00000441462 777 ntBASIC15.25■□□□□ 0.03
SMAD6O43541 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.25■□□□□ 0.03
SMAD6O43541 FAM86HP-204ENST00000513466 959 ntBASIC15.25■□□□□ 0.03
SMAD6O43541 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMAD6O43541 PPY2P-201ENST00000582808 702 ntBASIC15.25■□□□□ 0.03
SMAD6O43541 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SMAD6O43541 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SMAD6O43541 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.25■□□□□ 0.03
SMAD6O43541 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMAD6O43541 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.25■□□□□ 0.03
SMAD6O43541 AC011840.2-201ENST00000563063 1520 ntBASIC15.25■□□□□ 0.03
SMAD6O43541 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.25■□□□□ 0.03
SMAD6O43541 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMAD6O43541 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SMAD6O43541 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
SMAD6O43541 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.25■□□□□ 0.03
SMAD6O43541 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.25■□□□□ 0.03
SMAD6O43541 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SMAD6O43541 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SMAD6O43541 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMAD6O43541 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMAD6O43541 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMAD6O43541 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMAD6O43541 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMAD6O43541 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SMAD6O43541 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SMAD6O43541 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SMAD6O43541 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SMAD6O43541 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMAD6O43541 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.24■□□□□ 0.03
SMAD6O43541 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
SMAD6O43541 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMAD6O43541 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.24■□□□□ 0.03
SMAD6O43541 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMAD6O43541 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.24■□□□□ 0.03
SMAD6O43541 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms