Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXN1O15353 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC18.05■□□□□ 0.48
FOXN1O15353 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
FOXN1O15353 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
FOXN1O15353 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC18.05■□□□□ 0.48
FOXN1O15353 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
FOXN1O15353 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXN1O15353 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXN1O15353 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC18.05■□□□□ 0.48
FOXN1O15353 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
FOXN1O15353 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC18.05■□□□□ 0.48
FOXN1O15353 AL353637.1-201ENST00000451571 732 ntBASIC18.05■□□□□ 0.48
FOXN1O15353 REEP5-205ENST00000504247 480 ntTSL 5 BASIC18.05■□□□□ 0.48
FOXN1O15353 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC18.05■□□□□ 0.48
FOXN1O15353 DNM1P30-201ENST00000563586 452 ntBASIC18.05■□□□□ 0.48
FOXN1O15353 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
FOXN1O15353 AC015910.1-201ENST00000579400 975 ntBASIC18.05■□□□□ 0.48
FOXN1O15353 RN7SL713P-201ENST00000582127 302 ntBASIC18.05■□□□□ 0.48
FOXN1O15353 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC18.05■□□□□ 0.48
FOXN1O15353 AC107373.2-201ENST00000607735 490 ntBASIC18.05■□□□□ 0.48
FOXN1O15353 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
FOXN1O15353 FO393412.1-201ENST00000619841 382 ntBASIC18.05■□□□□ 0.48
FOXN1O15353 AC022748.3-201ENST00000621828 275 ntBASIC18.05■□□□□ 0.48
FOXN1O15353 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC18.05■□□□□ 0.48
FOXN1O15353 PRSS30P-206ENST00000641773 873 ntBASIC18.05■□□□□ 0.48
FOXN1O15353 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
FOXN1O15353 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
FOXN1O15353 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
FOXN1O15353 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXN1O15353 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC18.05■□□□□ 0.48
FOXN1O15353 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXN1O15353 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
FOXN1O15353 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXN1O15353 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXN1O15353 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXN1O15353 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
FOXN1O15353 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXN1O15353 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXN1O15353 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXN1O15353 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXN1O15353 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
FOXN1O15353 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
FOXN1O15353 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
FOXN1O15353 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXN1O15353 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC18.04■□□□□ 0.48
FOXN1O15353 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXN1O15353 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXN1O15353 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXN1O15353 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC18.04■□□□□ 0.48
FOXN1O15353 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC18.04■□□□□ 0.48
FOXN1O15353 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXN1O15353 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC18.04■□□□□ 0.48
FOXN1O15353 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC18.04■□□□□ 0.48
FOXN1O15353 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
FOXN1O15353 PDIA3P2-201ENST00000428073 158 ntBASIC18.04■□□□□ 0.48
FOXN1O15353 AC012362.1-201ENST00000434906 739 ntBASIC18.04■□□□□ 0.48
FOXN1O15353 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC18.04■□□□□ 0.48
FOXN1O15353 BUD31-205ENST00000456893 512 ntTSL 5 BASIC18.04■□□□□ 0.48
FOXN1O15353 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC18.04■□□□□ 0.48
FOXN1O15353 AC012158.2-201ENST00000536546 354 ntBASIC18.04■□□□□ 0.48
FOXN1O15353 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
FOXN1O15353 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC18.04■□□□□ 0.48
FOXN1O15353 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC18.04■□□□□ 0.48
FOXN1O15353 AC013355.1-201ENST00000562625 723 ntBASIC18.04■□□□□ 0.48
FOXN1O15353 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC18.04■□□□□ 0.48
FOXN1O15353 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC18.04■□□□□ 0.48
FOXN1O15353 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXN1O15353 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXN1O15353 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXN1O15353 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.04■□□□□ 0.48
FOXN1O15353 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.04■□□□□ 0.48
FOXN1O15353 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC18.04■□□□□ 0.48
FOXN1O15353 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
FOXN1O15353 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXN1O15353 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXN1O15353 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXN1O15353 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
FOXN1O15353 BNIP3P1-202ENST00000550043 1585 ntBASIC18.04■□□□□ 0.48
FOXN1O15353 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
FOXN1O15353 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
FOXN1O15353 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
FOXN1O15353 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXN1O15353 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.03■□□□□ 0.48
FOXN1O15353 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.03■□□□□ 0.48
FOXN1O15353 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
FOXN1O15353 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXN1O15353 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXN1O15353 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXN1O15353 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXN1O15353 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
FOXN1O15353 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
FOXN1O15353 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC18.03■□□□□ 0.48
FOXN1O15353 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC18.03■□□□□ 0.48
FOXN1O15353 EEF1DP4-201ENST00000446006 880 ntBASIC18.03■□□□□ 0.48
FOXN1O15353 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC18.03■□□□□ 0.48
FOXN1O15353 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
FOXN1O15353 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC18.03■□□□□ 0.48
FOXN1O15353 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC18.03■□□□□ 0.48
FOXN1O15353 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC18.03■□□□□ 0.48
FOXN1O15353 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms