Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
O00370 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.2■□□□□ 0.18
O00370 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.19■□□□□ 0.18
O00370 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
O00370 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.19■□□□□ 0.18
O00370 MSTO2P-201ENST00000314835 1709 ntBASIC16.19■□□□□ 0.18
O00370 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.19■□□□□ 0.18
O00370 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
O00370 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
O00370 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
O00370 AC232323.1-201ENST00000540724 2099 ntBASIC16.19■□□□□ 0.18
O00370 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.19■□□□□ 0.18
O00370 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
O00370 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
O00370 KLF2P2-201ENST00000416807 1039 ntBASIC16.19■□□□□ 0.18
O00370 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.19■□□□□ 0.18
O00370 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.19■□□□□ 0.18
O00370 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.19■□□□□ 0.18
O00370 AC022137.2-201ENST00000503482 481 ntBASIC16.19■□□□□ 0.18
O00370 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.19■□□□□ 0.18
O00370 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.19■□□□□ 0.18
O00370 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.19■□□□□ 0.18
O00370 AC005225.4-201ENST00000557330 545 ntBASIC16.19■□□□□ 0.18
O00370 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.19■□□□□ 0.18
O00370 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.19■□□□□ 0.18
O00370 AC009486.1-201ENST00000569860 813 ntBASIC16.19■□□□□ 0.18
O00370 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.19■□□□□ 0.18
O00370 IGHV3-72-202ENST00000621503 303 ntBASIC16.19■□□□□ 0.18
O00370 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC16.19■□□□□ 0.18
O00370 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
O00370 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
O00370 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
O00370 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
O00370 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
O00370 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.19■□□□□ 0.18
O00370 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
O00370 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.19■□□□□ 0.18
O00370 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
O00370 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
O00370 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
O00370 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.19■□□□□ 0.18
O00370 KRT8P14-201ENST00000414254 1442 ntBASIC16.19■□□□□ 0.18
O00370 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
O00370 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
O00370 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
O00370 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.19■□□□□ 0.18
O00370 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
O00370 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
O00370 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
O00370 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
O00370 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
O00370 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC16.18■□□□□ 0.18
O00370 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
O00370 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
O00370 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
O00370 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
O00370 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
O00370 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
O00370 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
O00370 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
O00370 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
O00370 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
O00370 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
O00370 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
O00370 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
O00370 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.18■□□□□ 0.18
O00370 AL512384.1-201ENST00000406683 331 ntBASIC16.18■□□□□ 0.18
O00370 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.18■□□□□ 0.18
O00370 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.18■□□□□ 0.18
O00370 AC114812.1-204ENST00000449669 728 ntBASIC16.18■□□□□ 0.18
O00370 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
O00370 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
O00370 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.18■□□□□ 0.18
O00370 AC132938.2-201ENST00000579188 680 ntBASIC16.18■□□□□ 0.18
O00370 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.18■□□□□ 0.18
O00370 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.18■□□□□ 0.18
O00370 AC012645.4-201ENST00000610691 1061 ntBASIC16.18■□□□□ 0.18
O00370 AL591163.1-201ENST00000641757 987 ntBASIC16.18■□□□□ 0.18
O00370 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
O00370 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.18■□□□□ 0.18
O00370 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
O00370 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
O00370 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
O00370 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
O00370 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
O00370 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
O00370 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
O00370 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
O00370 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.18■□□□□ 0.18
O00370 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
O00370 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
O00370 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.18■□□□□ 0.18
O00370 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
O00370 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
O00370 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
O00370 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
O00370 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
O00370 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
O00370 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.17■□□□□ 0.18
O00370 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms