Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UPK1AO00322 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
UPK1AO00322 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UPK1AO00322 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UPK1AO00322 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
UPK1AO00322 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.39□□□□□ -0.11
UPK1AO00322 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
UPK1AO00322 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UPK1AO00322 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UPK1AO00322 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UPK1AO00322 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
UPK1AO00322 AC012508.2-201ENST00000567613 1472 ntBASIC14.39□□□□□ -0.11
UPK1AO00322 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UPK1AO00322 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.39□□□□□ -0.11
UPK1AO00322 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.39□□□□□ -0.11
UPK1AO00322 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UPK1AO00322 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UPK1AO00322 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.39□□□□□ -0.11
UPK1AO00322 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.39□□□□□ -0.11
UPK1AO00322 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.39□□□□□ -0.11
UPK1AO00322 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.39□□□□□ -0.11
UPK1AO00322 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
UPK1AO00322 SPTLC1P1-201ENST00000447199 261 ntBASIC14.39□□□□□ -0.11
UPK1AO00322 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.39□□□□□ -0.11
UPK1AO00322 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UPK1AO00322 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.39□□□□□ -0.11
UPK1AO00322 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.39□□□□□ -0.11
UPK1AO00322 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UPK1AO00322 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UPK1AO00322 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.39□□□□□ -0.11
UPK1AO00322 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UPK1AO00322 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
UPK1AO00322 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UPK1AO00322 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
UPK1AO00322 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UPK1AO00322 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UPK1AO00322 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.39□□□□□ -0.11
UPK1AO00322 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
UPK1AO00322 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
UPK1AO00322 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UPK1AO00322 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
UPK1AO00322 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
UPK1AO00322 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UPK1AO00322 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UPK1AO00322 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.39□□□□□ -0.11
UPK1AO00322 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UPK1AO00322 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.39□□□□□ -0.11
UPK1AO00322 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UPK1AO00322 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UPK1AO00322 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.38□□□□□ -0.11
UPK1AO00322 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UPK1AO00322 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.38□□□□□ -0.11
UPK1AO00322 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
UPK1AO00322 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
UPK1AO00322 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
UPK1AO00322 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.38□□□□□ -0.11
UPK1AO00322 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UPK1AO00322 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UPK1AO00322 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UPK1AO00322 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UPK1AO00322 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UPK1AO00322 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
UPK1AO00322 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UPK1AO00322 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.38□□□□□ -0.11
UPK1AO00322 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.38□□□□□ -0.11
UPK1AO00322 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
UPK1AO00322 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.38□□□□□ -0.11
UPK1AO00322 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
UPK1AO00322 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
UPK1AO00322 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UPK1AO00322 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UPK1AO00322 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
UPK1AO00322 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UPK1AO00322 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
UPK1AO00322 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UPK1AO00322 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UPK1AO00322 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
UPK1AO00322 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.38□□□□□ -0.11
UPK1AO00322 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.38□□□□□ -0.11
UPK1AO00322 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.38□□□□□ -0.11
UPK1AO00322 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.38□□□□□ -0.11
UPK1AO00322 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.38□□□□□ -0.11
UPK1AO00322 AC093004.1-201ENST00000508850 424 ntBASIC14.38□□□□□ -0.11
UPK1AO00322 SERBP1P5-201ENST00000510079 1181 ntBASIC14.38□□□□□ -0.11
UPK1AO00322 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.38□□□□□ -0.11
UPK1AO00322 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.38□□□□□ -0.11
UPK1AO00322 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.38□□□□□ -0.11
UPK1AO00322 RRP7BP-205ENST00000566851 833 ntBASIC14.38□□□□□ -0.11
UPK1AO00322 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.38□□□□□ -0.11
UPK1AO00322 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.38□□□□□ -0.11
UPK1AO00322 SAMD11P1-201ENST00000571429 661 ntBASIC14.38□□□□□ -0.11
UPK1AO00322 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.38□□□□□ -0.11
UPK1AO00322 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.38□□□□□ -0.11
UPK1AO00322 AL662799.1-202ENST00000614205 422 ntBASIC14.38□□□□□ -0.11
UPK1AO00322 DRD5P1-201ENST00000456605 1438 ntBASIC14.38□□□□□ -0.11
UPK1AO00322 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.38□□□□□ -0.11
UPK1AO00322 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UPK1AO00322 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UPK1AO00322 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.38□□□□□ -0.11
UPK1AO00322 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms