Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.8■□□□□ 0.12
SRRM3A6NNA2 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.8■□□□□ 0.12
SRRM3A6NNA2 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.8■□□□□ 0.12
SRRM3A6NNA2 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SRRM3A6NNA2 AC109635.5-201ENST00000533593 962 ntBASIC15.8■□□□□ 0.12
SRRM3A6NNA2 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
SRRM3A6NNA2 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SRRM3A6NNA2 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.8■□□□□ 0.12
SRRM3A6NNA2 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SRRM3A6NNA2 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
SRRM3A6NNA2 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SRRM3A6NNA2 AC007431.3-201ENST00000623221 587 ntBASIC15.8■□□□□ 0.12
SRRM3A6NNA2 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC15.8■□□□□ 0.12
SRRM3A6NNA2 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SRRM3A6NNA2 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC15.8■□□□□ 0.12
SRRM3A6NNA2 MST1P2-201ENST00000457982 2291 ntBASIC15.8■□□□□ 0.12
SRRM3A6NNA2 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.8■□□□□ 0.12
SRRM3A6NNA2 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SRRM3A6NNA2 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SRRM3A6NNA2 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SRRM3A6NNA2 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SRRM3A6NNA2 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.8■□□□□ 0.12
SRRM3A6NNA2 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SRRM3A6NNA2 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.8■□□□□ 0.12
SRRM3A6NNA2 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
SRRM3A6NNA2 DGCR9-201ENST00000609630 2415 ntBASIC15.79■□□□□ 0.12
SRRM3A6NNA2 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.79■□□□□ 0.12
SRRM3A6NNA2 AL122018.1-201ENST00000446607 2310 ntBASIC15.79■□□□□ 0.12
SRRM3A6NNA2 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SRRM3A6NNA2 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SRRM3A6NNA2 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.79■□□□□ 0.12
SRRM3A6NNA2 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SRRM3A6NNA2 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
SRRM3A6NNA2 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SRRM3A6NNA2 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SRRM3A6NNA2 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SRRM3A6NNA2 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.79■□□□□ 0.12
SRRM3A6NNA2 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.79■□□□□ 0.12
SRRM3A6NNA2 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.79■□□□□ 0.12
SRRM3A6NNA2 TMEM14DP-201ENST00000422205 345 ntBASIC15.79■□□□□ 0.12
SRRM3A6NNA2 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.79■□□□□ 0.12
SRRM3A6NNA2 GOLGA2P4-201ENST00000441462 777 ntBASIC15.79■□□□□ 0.12
SRRM3A6NNA2 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SRRM3A6NNA2 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.79■□□□□ 0.12
SRRM3A6NNA2 AC104989.1-201ENST00000519711 778 ntBASIC15.79■□□□□ 0.12
SRRM3A6NNA2 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.79■□□□□ 0.12
SRRM3A6NNA2 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SRRM3A6NNA2 RARRES2P9-201ENST00000565168 469 ntBASIC15.79■□□□□ 0.12
SRRM3A6NNA2 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.79■□□□□ 0.12
SRRM3A6NNA2 TEX28P1-201ENST00000613479 1221 ntBASIC15.79■□□□□ 0.12
SRRM3A6NNA2 TEX28P2-201ENST00000617764 1221 ntBASIC15.79■□□□□ 0.12
SRRM3A6NNA2 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.79■□□□□ 0.12
SRRM3A6NNA2 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SRRM3A6NNA2 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SRRM3A6NNA2 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SRRM3A6NNA2 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SRRM3A6NNA2 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SRRM3A6NNA2 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SRRM3A6NNA2 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SRRM3A6NNA2 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SRRM3A6NNA2 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SRRM3A6NNA2 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
SRRM3A6NNA2 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SRRM3A6NNA2 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SRRM3A6NNA2 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
SRRM3A6NNA2 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.78■□□□□ 0.12
SRRM3A6NNA2 AC097359.2-201ENST00000604992 2389 ntBASIC15.78■□□□□ 0.12
SRRM3A6NNA2 MTHFR-210ENST00000641407 2387 ntBASIC15.78■□□□□ 0.12
SRRM3A6NNA2 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SRRM3A6NNA2 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SRRM3A6NNA2 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SRRM3A6NNA2 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SRRM3A6NNA2 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SRRM3A6NNA2 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SRRM3A6NNA2 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.78■□□□□ 0.12
SRRM3A6NNA2 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SRRM3A6NNA2 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
SRRM3A6NNA2 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.78■□□□□ 0.12
SRRM3A6NNA2 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.78■□□□□ 0.12
SRRM3A6NNA2 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.78■□□□□ 0.12
SRRM3A6NNA2 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.78■□□□□ 0.12
SRRM3A6NNA2 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.78■□□□□ 0.12
SRRM3A6NNA2 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.78■□□□□ 0.12
SRRM3A6NNA2 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.78■□□□□ 0.12
SRRM3A6NNA2 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SRRM3A6NNA2 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.78■□□□□ 0.12
SRRM3A6NNA2 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.78■□□□□ 0.12
SRRM3A6NNA2 RHOQP1-201ENST00000555758 579 ntBASIC15.78■□□□□ 0.12
SRRM3A6NNA2 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.78■□□□□ 0.12
SRRM3A6NNA2 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.78■□□□□ 0.12
SRRM3A6NNA2 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.78■□□□□ 0.12
SRRM3A6NNA2 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.78■□□□□ 0.12
SRRM3A6NNA2 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
SRRM3A6NNA2 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.78■□□□□ 0.12
SRRM3A6NNA2 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SRRM3A6NNA2 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
SRRM3A6NNA2 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SRRM3A6NNA2 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SRRM3A6NNA2 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SRRM3A6NNA2 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms