Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 AC019294.4-201ENST00000561777 2905 ntBASIC10.68□□□□□ -0.7
LINC01546A6NGU7 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 HSPA8P5-201ENST00000456928 2069 ntBASIC10.68□□□□□ -0.7
LINC01546A6NGU7 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 Z98257.2-202ENST00000641138 1548 ntBASIC10.68□□□□□ -0.7
LINC01546A6NGU7 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
LINC01546A6NGU7 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
LINC01546A6NGU7 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01546A6NGU7 AC118758.2-201ENST00000614242 2813 ntBASIC10.67□□□□□ -0.7
LINC01546A6NGU7 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC10.67□□□□□ -0.7
LINC01546A6NGU7 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
LINC01546A6NGU7 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
LINC01546A6NGU7 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01546A6NGU7 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01546A6NGU7 AP000437.1-201ENST00000624057 2085 ntBASIC10.67□□□□□ -0.7
LINC01546A6NGU7 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01546A6NGU7 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
LINC01546A6NGU7 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC10.67□□□□□ -0.7
LINC01546A6NGU7 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
LINC01546A6NGU7 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01546A6NGU7 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01546A6NGU7 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01546A6NGU7 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01546A6NGU7 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC10.67□□□□□ -0.7
LINC01546A6NGU7 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
LINC01546A6NGU7 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01546A6NGU7 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01546A6NGU7 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01546A6NGU7 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01546A6NGU7 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01546A6NGU7 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC10.67□□□□□ -0.7
LINC01546A6NGU7 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01546A6NGU7 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
LINC01546A6NGU7 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01546A6NGU7 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC10.67□□□□□ -0.7
LINC01546A6NGU7 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC10.67□□□□□ -0.7
LINC01546A6NGU7 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01546A6NGU7 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC10.67□□□□□ -0.7
LINC01546A6NGU7 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC10.67□□□□□ -0.7
LINC01546A6NGU7 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC10.67□□□□□ -0.7
LINC01546A6NGU7 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC10.67□□□□□ -0.7
LINC01546A6NGU7 NME3-204ENST00000563498 920 ntTSL 2 BASIC10.67□□□□□ -0.7
LINC01546A6NGU7 AP002472.1-201ENST00000577490 586 ntBASIC10.67□□□□□ -0.7
LINC01546A6NGU7 AC068137.2-201ENST00000605408 478 ntBASIC10.67□□□□□ -0.7
LINC01546A6NGU7 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC10.67□□□□□ -0.7
LINC01546A6NGU7 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01546A6NGU7 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01546A6NGU7 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC10.67□□□□□ -0.7
LINC01546A6NGU7 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC10.67□□□□□ -0.7
LINC01546A6NGU7 AC097376.2-205ENST00000610159 5334 ntBASIC10.67□□□□□ -0.7
LINC01546A6NGU7 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
LINC01546A6NGU7 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01546A6NGU7 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01546A6NGU7 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC10.67□□□□□ -0.7
LINC01546A6NGU7 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC10.67□□□□□ -0.7
LINC01546A6NGU7 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC10.67□□□□□ -0.7
LINC01546A6NGU7 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01546A6NGU7 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01546A6NGU7 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC10.67□□□□□ -0.7
LINC01546A6NGU7 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01546A6NGU7 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01546A6NGU7 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms