Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 AC138028.6-201ENST00000616106 1482 ntBASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.25□□□□□ -0.13
PCDHGA9Q9Y5G4 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 AC114812.1-204ENST00000449669 728 ntBASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 SCARNA20.5-201ENST00000516991 142 ntBASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 RHOQP1-201ENST00000555758 579 ntBASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 AP006547.1-201ENST00000563435 692 ntBASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 RN7SL48P-201ENST00000579283 293 ntBASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 AC005695.3-201ENST00000614522 232 ntBASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHGA9Q9Y5G4 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 MIR1202-201ENST00000408529 83 ntBASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.23□□□□□ -0.13
PCDHGA9Q9Y5G4 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms