Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.52■□□□□ 0.4
CTDP1Q9Y5B0 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTDP1Q9Y5B0 KRT8P4-201ENST00000509735 1454 ntBASIC17.52■□□□□ 0.4
CTDP1Q9Y5B0 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CTDP1Q9Y5B0 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CTDP1Q9Y5B0 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTDP1Q9Y5B0 CICP11-201ENST00000434745 2827 ntBASIC17.52■□□□□ 0.4
CTDP1Q9Y5B0 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTDP1Q9Y5B0 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
CTDP1Q9Y5B0 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CTDP1Q9Y5B0 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CTDP1Q9Y5B0 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC17.52■□□□□ 0.4
CTDP1Q9Y5B0 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC17.52■□□□□ 0.4
CTDP1Q9Y5B0 PTPA-218ENST00000435132 618 ntTSL 2 BASIC17.52■□□□□ 0.4
CTDP1Q9Y5B0 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC17.52■□□□□ 0.4
CTDP1Q9Y5B0 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CTDP1Q9Y5B0 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
CTDP1Q9Y5B0 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC17.52■□□□□ 0.4
CTDP1Q9Y5B0 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC17.52■□□□□ 0.4
CTDP1Q9Y5B0 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC17.52■□□□□ 0.4
CTDP1Q9Y5B0 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTDP1Q9Y5B0 C2orf69P2-201ENST00000562032 1123 ntBASIC17.52■□□□□ 0.4
CTDP1Q9Y5B0 RN7SL713P-201ENST00000582127 302 ntBASIC17.52■□□□□ 0.4
CTDP1Q9Y5B0 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC17.52■□□□□ 0.4
CTDP1Q9Y5B0 AC005695.3-201ENST00000614522 232 ntBASIC17.52■□□□□ 0.4
CTDP1Q9Y5B0 AC244157.2-201ENST00000616239 1006 ntBASIC17.52■□□□□ 0.4
CTDP1Q9Y5B0 AL008638.5-201ENST00000623814 1298 ntBASIC17.52■□□□□ 0.4
CTDP1Q9Y5B0 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CTDP1Q9Y5B0 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.52■□□□□ 0.4
CTDP1Q9Y5B0 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTDP1Q9Y5B0 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTDP1Q9Y5B0 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.52■□□□□ 0.39
CTDP1Q9Y5B0 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CTDP1Q9Y5B0 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CTDP1Q9Y5B0 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CTDP1Q9Y5B0 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CTDP1Q9Y5B0 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CTDP1Q9Y5B0 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC17.52■□□□□ 0.39
CTDP1Q9Y5B0 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CTDP1Q9Y5B0 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CTDP1Q9Y5B0 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
CTDP1Q9Y5B0 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
CTDP1Q9Y5B0 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CTDP1Q9Y5B0 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC17.51■□□□□ 0.39
CTDP1Q9Y5B0 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTDP1Q9Y5B0 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.51■□□□□ 0.39
CTDP1Q9Y5B0 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTDP1Q9Y5B0 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTDP1Q9Y5B0 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTDP1Q9Y5B0 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTDP1Q9Y5B0 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTDP1Q9Y5B0 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTDP1Q9Y5B0 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTDP1Q9Y5B0 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTDP1Q9Y5B0 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTDP1Q9Y5B0 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTDP1Q9Y5B0 AGER-203ENST00000375065 665 ntTSL 2 BASIC17.51■□□□□ 0.39
CTDP1Q9Y5B0 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTDP1Q9Y5B0 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.51■□□□□ 0.39
CTDP1Q9Y5B0 POM121L8P-201ENST00000417732 1281 ntBASIC17.51■□□□□ 0.39
CTDP1Q9Y5B0 POM121L9P-203ENST00000441984 1285 ntBASIC17.51■□□□□ 0.39
CTDP1Q9Y5B0 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTDP1Q9Y5B0 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTDP1Q9Y5B0 FTLP10-202ENST00000505798 471 ntBASIC17.51■□□□□ 0.39
CTDP1Q9Y5B0 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTDP1Q9Y5B0 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTDP1Q9Y5B0 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTDP1Q9Y5B0 DIO1-215ENST00000610607 796 ntTSL 5 BASIC17.51■□□□□ 0.39
CTDP1Q9Y5B0 ZACNP1-201ENST00000612259 710 ntBASIC17.51■□□□□ 0.39
CTDP1Q9Y5B0 AC244452.3-201ENST00000636814 210 ntBASIC17.51■□□□□ 0.39
CTDP1Q9Y5B0 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTDP1Q9Y5B0 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTDP1Q9Y5B0 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTDP1Q9Y5B0 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.51■□□□□ 0.39
CTDP1Q9Y5B0 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTDP1Q9Y5B0 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTDP1Q9Y5B0 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTDP1Q9Y5B0 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTDP1Q9Y5B0 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTDP1Q9Y5B0 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CTDP1Q9Y5B0 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTDP1Q9Y5B0 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTDP1Q9Y5B0 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
CTDP1Q9Y5B0 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.5■□□□□ 0.39
CTDP1Q9Y5B0 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CTDP1Q9Y5B0 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTDP1Q9Y5B0 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
CTDP1Q9Y5B0 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.5■□□□□ 0.39
CTDP1Q9Y5B0 AL023775.1-201ENST00000454907 1746 ntBASIC17.5■□□□□ 0.39
CTDP1Q9Y5B0 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
CTDP1Q9Y5B0 PES1-204ENST00000402284 2144 ntTSL 5 BASIC17.5■□□□□ 0.39
CTDP1Q9Y5B0 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTDP1Q9Y5B0 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CTDP1Q9Y5B0 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTDP1Q9Y5B0 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTDP1Q9Y5B0 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTDP1Q9Y5B0 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTDP1Q9Y5B0 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.5■□□□□ 0.39
CTDP1Q9Y5B0 AL391280.1-201ENST00000506969 1062 ntBASIC17.5■□□□□ 0.39
CTDP1Q9Y5B0 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms