Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
LRCH1Q9Y2L9 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.52□□□□□ -0.08
LRCH1Q9Y2L9 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRCH1Q9Y2L9 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
LRCH1Q9Y2L9 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
LRCH1Q9Y2L9 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.52□□□□□ -0.08
LRCH1Q9Y2L9 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRCH1Q9Y2L9 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRCH1Q9Y2L9 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LRCH1Q9Y2L9 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRCH1Q9Y2L9 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRCH1Q9Y2L9 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
LRCH1Q9Y2L9 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.52□□□□□ -0.08
LRCH1Q9Y2L9 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
LRCH1Q9Y2L9 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRCH1Q9Y2L9 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LRCH1Q9Y2L9 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRCH1Q9Y2L9 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC14.52□□□□□ -0.08
LRCH1Q9Y2L9 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LRCH1Q9Y2L9 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRCH1Q9Y2L9 IL9RP2-201ENST00000423948 1312 ntBASIC14.52□□□□□ -0.08
LRCH1Q9Y2L9 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.52□□□□□ -0.08
LRCH1Q9Y2L9 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
LRCH1Q9Y2L9 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRCH1Q9Y2L9 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
LRCH1Q9Y2L9 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LRCH1Q9Y2L9 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRCH1Q9Y2L9 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.52□□□□□ -0.09
LRCH1Q9Y2L9 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRCH1Q9Y2L9 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.52□□□□□ -0.09
LRCH1Q9Y2L9 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LRCH1Q9Y2L9 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.52□□□□□ -0.09
LRCH1Q9Y2L9 HNRNPDP1-201ENST00000439535 754 ntBASIC14.52□□□□□ -0.09
LRCH1Q9Y2L9 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.52□□□□□ -0.09
LRCH1Q9Y2L9 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.52□□□□□ -0.09
LRCH1Q9Y2L9 AL589182.2-201ENST00000619332 1049 ntBASIC14.52□□□□□ -0.09
LRCH1Q9Y2L9 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.52□□□□□ -0.09
LRCH1Q9Y2L9 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.52□□□□□ -0.09
LRCH1Q9Y2L9 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
LRCH1Q9Y2L9 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
LRCH1Q9Y2L9 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRCH1Q9Y2L9 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRCH1Q9Y2L9 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
LRCH1Q9Y2L9 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.52□□□□□ -0.09
LRCH1Q9Y2L9 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRCH1Q9Y2L9 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
LRCH1Q9Y2L9 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRCH1Q9Y2L9 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.52□□□□□ -0.09
LRCH1Q9Y2L9 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 AC105339.3-201ENST00000560043 636 ntBASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 MIR1199-201ENST00000621445 119 ntBASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRCH1Q9Y2L9 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms