Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SSX2IPQ9Y2D8 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SSX2IPQ9Y2D8 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
SSX2IPQ9Y2D8 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SSX2IPQ9Y2D8 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SSX2IPQ9Y2D8 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.38■□□□□ 0.21
SSX2IPQ9Y2D8 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SSX2IPQ9Y2D8 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SSX2IPQ9Y2D8 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SSX2IPQ9Y2D8 AGER-203ENST00000375065 665 ntTSL 2 BASIC16.38■□□□□ 0.21
SSX2IPQ9Y2D8 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.38■□□□□ 0.21
SSX2IPQ9Y2D8 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC16.38■□□□□ 0.21
SSX2IPQ9Y2D8 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SSX2IPQ9Y2D8 HOMER2P2-201ENST00000451621 847 ntBASIC16.38■□□□□ 0.21
SSX2IPQ9Y2D8 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC16.38■□□□□ 0.21
SSX2IPQ9Y2D8 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC16.38■□□□□ 0.21
SSX2IPQ9Y2D8 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC16.38■□□□□ 0.21
SSX2IPQ9Y2D8 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC16.38■□□□□ 0.21
SSX2IPQ9Y2D8 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC16.38■□□□□ 0.21
SSX2IPQ9Y2D8 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
SSX2IPQ9Y2D8 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.38■□□□□ 0.21
SSX2IPQ9Y2D8 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC16.38■□□□□ 0.21
SSX2IPQ9Y2D8 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.38■□□□□ 0.21
SSX2IPQ9Y2D8 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC16.38■□□□□ 0.21
SSX2IPQ9Y2D8 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SSX2IPQ9Y2D8 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.38■□□□□ 0.21
SSX2IPQ9Y2D8 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SSX2IPQ9Y2D8 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SSX2IPQ9Y2D8 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC16.38■□□□□ 0.21
SSX2IPQ9Y2D8 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.38■□□□□ 0.21
SSX2IPQ9Y2D8 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.38■□□□□ 0.21
SSX2IPQ9Y2D8 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.38■□□□□ 0.21
SSX2IPQ9Y2D8 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SSX2IPQ9Y2D8 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SSX2IPQ9Y2D8 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.38■□□□□ 0.21
SSX2IPQ9Y2D8 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SSX2IPQ9Y2D8 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SSX2IPQ9Y2D8 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.37■□□□□ 0.21
SSX2IPQ9Y2D8 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SSX2IPQ9Y2D8 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.37■□□□□ 0.21
SSX2IPQ9Y2D8 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SSX2IPQ9Y2D8 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.37■□□□□ 0.21
SSX2IPQ9Y2D8 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SSX2IPQ9Y2D8 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
SSX2IPQ9Y2D8 AC015818.8-201ENST00000587907 1519 ntBASIC16.37■□□□□ 0.21
SSX2IPQ9Y2D8 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SSX2IPQ9Y2D8 RNU1-114P-201ENST00000365297 166 ntBASIC16.37■□□□□ 0.21
SSX2IPQ9Y2D8 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
SSX2IPQ9Y2D8 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.37■□□□□ 0.21
SSX2IPQ9Y2D8 AC245100.3-201ENST00000441281 285 ntBASIC16.37■□□□□ 0.21
SSX2IPQ9Y2D8 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
SSX2IPQ9Y2D8 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.37■□□□□ 0.21
SSX2IPQ9Y2D8 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC16.37■□□□□ 0.21
SSX2IPQ9Y2D8 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.37■□□□□ 0.21
SSX2IPQ9Y2D8 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC16.37■□□□□ 0.21
SSX2IPQ9Y2D8 EEF1DP1-201ENST00000585891 896 ntBASIC16.37■□□□□ 0.21
SSX2IPQ9Y2D8 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.37■□□□□ 0.21
SSX2IPQ9Y2D8 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16.37■□□□□ 0.21
SSX2IPQ9Y2D8 AC084346.2-201ENST00000607097 949 ntBASIC16.37■□□□□ 0.21
SSX2IPQ9Y2D8 AL139099.5-201ENST00000635274 300 ntBASIC16.37■□□□□ 0.21
SSX2IPQ9Y2D8 AC244452.3-201ENST00000636814 210 ntBASIC16.37■□□□□ 0.21
SSX2IPQ9Y2D8 AL645728.2-202ENST00000641679 227 ntBASIC16.37■□□□□ 0.21
SSX2IPQ9Y2D8 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SSX2IPQ9Y2D8 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SSX2IPQ9Y2D8 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SSX2IPQ9Y2D8 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SSX2IPQ9Y2D8 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SSX2IPQ9Y2D8 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SSX2IPQ9Y2D8 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SSX2IPQ9Y2D8 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SSX2IPQ9Y2D8 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SSX2IPQ9Y2D8 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SSX2IPQ9Y2D8 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSX2IPQ9Y2D8 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.36■□□□□ 0.21
SSX2IPQ9Y2D8 ABR-205ENST00000544583 5595 ntTSL 2 BASIC16.36■□□□□ 0.21
SSX2IPQ9Y2D8 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSX2IPQ9Y2D8 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SSX2IPQ9Y2D8 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSX2IPQ9Y2D8 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSX2IPQ9Y2D8 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SSX2IPQ9Y2D8 AL354989.2-201ENST00000435838 1540 ntBASIC16.36■□□□□ 0.21
SSX2IPQ9Y2D8 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSX2IPQ9Y2D8 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSX2IPQ9Y2D8 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SSX2IPQ9Y2D8 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SSX2IPQ9Y2D8 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSX2IPQ9Y2D8 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SSX2IPQ9Y2D8 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.36■□□□□ 0.21
SSX2IPQ9Y2D8 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC16.36■□□□□ 0.21
SSX2IPQ9Y2D8 MTX1P1-201ENST00000440904 838 ntBASIC16.36■□□□□ 0.21
SSX2IPQ9Y2D8 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC16.36■□□□□ 0.21
SSX2IPQ9Y2D8 AC104306.2-201ENST00000451877 341 ntBASIC16.36■□□□□ 0.21
SSX2IPQ9Y2D8 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SSX2IPQ9Y2D8 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC16.36■□□□□ 0.21
SSX2IPQ9Y2D8 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.36■□□□□ 0.21
SSX2IPQ9Y2D8 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.36■□□□□ 0.21
SSX2IPQ9Y2D8 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC16.36■□□□□ 0.21
SSX2IPQ9Y2D8 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.36■□□□□ 0.21
SSX2IPQ9Y2D8 HNRNPA1P48-202ENST00000565308 961 ntBASIC16.36■□□□□ 0.21
SSX2IPQ9Y2D8 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms