Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
DENND2AQ9ULE3 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC18.29■□□□□ 0.52
DENND2AQ9ULE3 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DENND2AQ9ULE3 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
DENND2AQ9ULE3 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DENND2AQ9ULE3 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC18.29■□□□□ 0.52
DENND2AQ9ULE3 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DENND2AQ9ULE3 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DENND2AQ9ULE3 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
DENND2AQ9ULE3 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
DENND2AQ9ULE3 NDUFAB1P1-201ENST00000404262 460 ntBASIC18.29■□□□□ 0.52
DENND2AQ9ULE3 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
DENND2AQ9ULE3 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC18.29■□□□□ 0.52
DENND2AQ9ULE3 POM121L10P-201ENST00000436994 1285 ntBASIC18.29■□□□□ 0.52
DENND2AQ9ULE3 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC18.29■□□□□ 0.52
DENND2AQ9ULE3 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC18.29■□□□□ 0.52
DENND2AQ9ULE3 AP002414.2-201ENST00000591780 3365 ntBASIC18.29■□□□□ 0.52
DENND2AQ9ULE3 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC18.29■□□□□ 0.52
DENND2AQ9ULE3 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DENND2AQ9ULE3 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DENND2AQ9ULE3 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DENND2AQ9ULE3 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.29■□□□□ 0.52
DENND2AQ9ULE3 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC18.29■□□□□ 0.52
DENND2AQ9ULE3 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DENND2AQ9ULE3 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
DENND2AQ9ULE3 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DENND2AQ9ULE3 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DENND2AQ9ULE3 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
DENND2AQ9ULE3 ZEB1-AS1-208ENST00000607166 2503 ntBASIC18.28■□□□□ 0.52
DENND2AQ9ULE3 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DENND2AQ9ULE3 MYB-242ENST00000618728 3545 ntTSL 5 BASIC18.28■□□□□ 0.52
DENND2AQ9ULE3 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
DENND2AQ9ULE3 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
DENND2AQ9ULE3 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
DENND2AQ9ULE3 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
DENND2AQ9ULE3 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DENND2AQ9ULE3 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DENND2AQ9ULE3 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
DENND2AQ9ULE3 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
DENND2AQ9ULE3 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC18.28■□□□□ 0.52
DENND2AQ9ULE3 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DENND2AQ9ULE3 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DENND2AQ9ULE3 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DENND2AQ9ULE3 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
DENND2AQ9ULE3 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
DENND2AQ9ULE3 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC18.28■□□□□ 0.52
DENND2AQ9ULE3 AC004898.1-201ENST00000451057 766 ntBASIC18.28■□□□□ 0.52
DENND2AQ9ULE3 OARD1-212ENST00000482515 832 ntTSL 2 BASIC18.28■□□□□ 0.52
DENND2AQ9ULE3 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC18.28■□□□□ 0.52
DENND2AQ9ULE3 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
DENND2AQ9ULE3 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC18.28■□□□□ 0.52
DENND2AQ9ULE3 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC18.28■□□□□ 0.52
DENND2AQ9ULE3 AP001002.3-201ENST00000623482 206 ntBASIC18.28■□□□□ 0.52
DENND2AQ9ULE3 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
DENND2AQ9ULE3 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
DENND2AQ9ULE3 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DENND2AQ9ULE3 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
DENND2AQ9ULE3 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
DENND2AQ9ULE3 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
DENND2AQ9ULE3 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
DENND2AQ9ULE3 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
DENND2AQ9ULE3 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
DENND2AQ9ULE3 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DENND2AQ9ULE3 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC18.28■□□□□ 0.52
DENND2AQ9ULE3 WASH3P-207ENST00000560956 1394 ntBASIC18.28■□□□□ 0.52
DENND2AQ9ULE3 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DENND2AQ9ULE3 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DENND2AQ9ULE3 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
DENND2AQ9ULE3 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC18.28■□□□□ 0.52
DENND2AQ9ULE3 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
DENND2AQ9ULE3 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
DENND2AQ9ULE3 AC126177.1-201ENST00000547829 2218 ntBASIC18.27■□□□□ 0.52
DENND2AQ9ULE3 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DENND2AQ9ULE3 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DENND2AQ9ULE3 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
DENND2AQ9ULE3 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
DENND2AQ9ULE3 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
DENND2AQ9ULE3 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DENND2AQ9ULE3 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
DENND2AQ9ULE3 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
DENND2AQ9ULE3 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DENND2AQ9ULE3 AGER-203ENST00000375065 665 ntTSL 2 BASIC18.27■□□□□ 0.52
DENND2AQ9ULE3 RN7SKP175-201ENST00000408472 289 ntBASIC18.27■□□□□ 0.52
DENND2AQ9ULE3 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC18.27■□□□□ 0.52
DENND2AQ9ULE3 PTPA-218ENST00000435132 618 ntTSL 2 BASIC18.27■□□□□ 0.52
DENND2AQ9ULE3 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DENND2AQ9ULE3 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC18.27■□□□□ 0.52
DENND2AQ9ULE3 AC100850.1-201ENST00000506768 649 ntBASIC18.27■□□□□ 0.52
DENND2AQ9ULE3 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC18.27■□□□□ 0.52
DENND2AQ9ULE3 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DENND2AQ9ULE3 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC18.27■□□□□ 0.52
DENND2AQ9ULE3 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC18.27■□□□□ 0.52
DENND2AQ9ULE3 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DENND2AQ9ULE3 KLK11-210ENST00000600362 759 ntTSL 3 BASIC18.27■□□□□ 0.52
DENND2AQ9ULE3 AC138696.2-201ENST00000607376 223 ntBASIC18.27■□□□□ 0.52
DENND2AQ9ULE3 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC18.27■□□□□ 0.52
DENND2AQ9ULE3 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DENND2AQ9ULE3 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DENND2AQ9ULE3 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DENND2AQ9ULE3 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms