Protein–RNA interactions for Protein: Q9UBF6

RNF7, RING-box protein 2, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7Q9UBF6 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RNF7Q9UBF6 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.82□□□□□ -0.36
RNF7Q9UBF6 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
RNF7Q9UBF6 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
RNF7Q9UBF6 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RNF7Q9UBF6 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
RNF7Q9UBF6 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RNF7Q9UBF6 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
RNF7Q9UBF6 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC12.82□□□□□ -0.36
RNF7Q9UBF6 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC12.82□□□□□ -0.36
RNF7Q9UBF6 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
RNF7Q9UBF6 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC12.82□□□□□ -0.36
RNF7Q9UBF6 RPL28-203ENST00000428193 573 ntTSL 2 BASIC12.82□□□□□ -0.36
RNF7Q9UBF6 GSAP-205ENST00000430584 600 ntTSL 5 BASIC12.82□□□□□ -0.36
RNF7Q9UBF6 RPL28-204ENST00000431533 590 ntTSL 2 BASIC12.82□□□□□ -0.36
RNF7Q9UBF6 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC12.82□□□□□ -0.36
RNF7Q9UBF6 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC12.82□□□□□ -0.36
RNF7Q9UBF6 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
RNF7Q9UBF6 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RNF7Q9UBF6 RPL28-207ENST00000558815 616 ntTSL 2 BASIC12.82□□□□□ -0.36
RNF7Q9UBF6 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC12.82□□□□□ -0.36
RNF7Q9UBF6 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC12.82□□□□□ -0.36
RNF7Q9UBF6 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC12.82□□□□□ -0.36
RNF7Q9UBF6 AC008735.3-201ENST00000596646 500 ntBASIC12.82□□□□□ -0.36
RNF7Q9UBF6 AC233724.13-201ENST00000598383 410 ntBASIC12.82□□□□□ -0.36
RNF7Q9UBF6 AL022328.1-201ENST00000610050 478 ntBASIC12.82□□□□□ -0.36
RNF7Q9UBF6 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
RNF7Q9UBF6 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RNF7Q9UBF6 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC12.82□□□□□ -0.36
RNF7Q9UBF6 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
RNF7Q9UBF6 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
RNF7Q9UBF6 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC12.82□□□□□ -0.36
RNF7Q9UBF6 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RNF7Q9UBF6 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RNF7Q9UBF6 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
RNF7Q9UBF6 TCAF2P1-201ENST00000291129 2421 ntBASIC12.82□□□□□ -0.36
RNF7Q9UBF6 MECR-202ENST00000373791 2416 ntTSL 2 BASIC12.82□□□□□ -0.36
RNF7Q9UBF6 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC12.82□□□□□ -0.36
RNF7Q9UBF6 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RNF7Q9UBF6 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RNF7Q9UBF6 REXO1L2P-201ENST00000425429 2069 ntBASIC12.82□□□□□ -0.36
RNF7Q9UBF6 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RNF7Q9UBF6 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC12.82□□□□□ -0.36
RNF7Q9UBF6 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RNF7Q9UBF6 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
RNF7Q9UBF6 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
RNF7Q9UBF6 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RNF7Q9UBF6 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
RNF7Q9UBF6 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
RNF7Q9UBF6 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
RNF7Q9UBF6 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
RNF7Q9UBF6 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.81□□□□□ -0.36
RNF7Q9UBF6 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RNF7Q9UBF6 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.81□□□□□ -0.36
RNF7Q9UBF6 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
RNF7Q9UBF6 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RNF7Q9UBF6 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC12.81□□□□□ -0.36
RNF7Q9UBF6 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC12.81□□□□□ -0.36
RNF7Q9UBF6 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RNF7Q9UBF6 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC12.81□□□□□ -0.36
RNF7Q9UBF6 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RNF7Q9UBF6 AC144831.1-201ENST00000573312 2656 ntBASIC12.81□□□□□ -0.36
RNF7Q9UBF6 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC12.81□□□□□ -0.36
RNF7Q9UBF6 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC12.81□□□□□ -0.36
RNF7Q9UBF6 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC12.81□□□□□ -0.36
RNF7Q9UBF6 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RNF7Q9UBF6 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC12.81□□□□□ -0.36
RNF7Q9UBF6 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RNF7Q9UBF6 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RNF7Q9UBF6 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC12.81□□□□□ -0.36
RNF7Q9UBF6 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RNF7Q9UBF6 AC005229.1-201ENST00000392885 409 ntBASIC12.81□□□□□ -0.36
RNF7Q9UBF6 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
RNF7Q9UBF6 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC12.81□□□□□ -0.36
RNF7Q9UBF6 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RNF7Q9UBF6 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC12.81□□□□□ -0.36
RNF7Q9UBF6 KRT43P-201ENST00000434019 910 ntBASIC12.81□□□□□ -0.36
RNF7Q9UBF6 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RNF7Q9UBF6 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC12.81□□□□□ -0.36
RNF7Q9UBF6 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.81□□□□□ -0.36
RNF7Q9UBF6 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC12.81□□□□□ -0.36
RNF7Q9UBF6 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC12.81□□□□□ -0.36
RNF7Q9UBF6 BTNL10-201ENST00000595971 695 ntBASIC12.81□□□□□ -0.36
RNF7Q9UBF6 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC12.81□□□□□ -0.36
RNF7Q9UBF6 AL035252.4-201ENST00000624174 288 ntBASIC12.81□□□□□ -0.36
RNF7Q9UBF6 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC12.81□□□□□ -0.36
RNF7Q9UBF6 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RNF7Q9UBF6 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RNF7Q9UBF6 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RNF7Q9UBF6 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
RNF7Q9UBF6 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RNF7Q9UBF6 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RNF7Q9UBF6 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RNF7Q9UBF6 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.81□□□□□ -0.36
RNF7Q9UBF6 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC12.81□□□□□ -0.36
RNF7Q9UBF6 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RNF7Q9UBF6 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RNF7Q9UBF6 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC12.81□□□□□ -0.36
RNF7Q9UBF6 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RNF7Q9UBF6 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms