Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCM2LQ9NUG4 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCM2LQ9NUG4 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCM2LQ9NUG4 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCM2LQ9NUG4 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCM2LQ9NUG4 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCM2LQ9NUG4 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CCM2LQ9NUG4 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCM2LQ9NUG4 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCM2LQ9NUG4 MST1P2-201ENST00000457982 2291 ntBASIC14.53□□□□□ -0.08
CCM2LQ9NUG4 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCM2LQ9NUG4 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
CCM2LQ9NUG4 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CCM2LQ9NUG4 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CCM2LQ9NUG4 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCM2LQ9NUG4 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCM2LQ9NUG4 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.53□□□□□ -0.08
CCM2LQ9NUG4 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCM2LQ9NUG4 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCM2LQ9NUG4 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCM2LQ9NUG4 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCM2LQ9NUG4 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.53□□□□□ -0.08
CCM2LQ9NUG4 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.53□□□□□ -0.08
CCM2LQ9NUG4 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCM2LQ9NUG4 CR383656.12-201ENST00000549567 513 ntBASIC14.53□□□□□ -0.08
CCM2LQ9NUG4 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.53□□□□□ -0.08
CCM2LQ9NUG4 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCM2LQ9NUG4 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCM2LQ9NUG4 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CCM2LQ9NUG4 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.53□□□□□ -0.08
CCM2LQ9NUG4 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCM2LQ9NUG4 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCM2LQ9NUG4 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CCM2LQ9NUG4 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCM2LQ9NUG4 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CCM2LQ9NUG4 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.53□□□□□ -0.08
CCM2LQ9NUG4 AL359183.1-201ENST00000623796 2132 ntBASIC14.53□□□□□ -0.08
CCM2LQ9NUG4 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CCM2LQ9NUG4 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.53□□□□□ -0.08
CCM2LQ9NUG4 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCM2LQ9NUG4 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCM2LQ9NUG4 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCM2LQ9NUG4 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CCM2LQ9NUG4 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.52□□□□□ -0.08
CCM2LQ9NUG4 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
CCM2LQ9NUG4 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
CCM2LQ9NUG4 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCM2LQ9NUG4 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.52□□□□□ -0.08
CCM2LQ9NUG4 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCM2LQ9NUG4 SBF1P1-201ENST00000444527 5631 ntBASIC14.52□□□□□ -0.08
CCM2LQ9NUG4 UXT-AS1-201ENST00000590504 1525 ntBASIC14.52□□□□□ -0.08
CCM2LQ9NUG4 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCM2LQ9NUG4 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCM2LQ9NUG4 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCM2LQ9NUG4 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCM2LQ9NUG4 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCM2LQ9NUG4 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.52□□□□□ -0.08
CCM2LQ9NUG4 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
CCM2LQ9NUG4 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.52□□□□□ -0.08
CCM2LQ9NUG4 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CCM2LQ9NUG4 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CCM2LQ9NUG4 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCM2LQ9NUG4 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCM2LQ9NUG4 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCM2LQ9NUG4 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCM2LQ9NUG4 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCM2LQ9NUG4 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.52□□□□□ -0.09
CCM2LQ9NUG4 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
CCM2LQ9NUG4 SPDYE7P-202ENST00000420373 878 ntBASIC14.52□□□□□ -0.09
CCM2LQ9NUG4 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.52□□□□□ -0.09
CCM2LQ9NUG4 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.52□□□□□ -0.09
CCM2LQ9NUG4 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCM2LQ9NUG4 RNA5SP410-201ENST00000516285 106 ntBASIC14.52□□□□□ -0.09
CCM2LQ9NUG4 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.52□□□□□ -0.09
CCM2LQ9NUG4 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.52□□□□□ -0.09
CCM2LQ9NUG4 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
CCM2LQ9NUG4 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCM2LQ9NUG4 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCM2LQ9NUG4 MIR6752-201ENST00000618442 71 ntBASIC14.52□□□□□ -0.09
CCM2LQ9NUG4 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCM2LQ9NUG4 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CCM2LQ9NUG4 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CCM2LQ9NUG4 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CCM2LQ9NUG4 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CCM2LQ9NUG4 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCM2LQ9NUG4 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CCM2LQ9NUG4 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCM2LQ9NUG4 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.52□□□□□ -0.09
CCM2LQ9NUG4 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
CCM2LQ9NUG4 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.52□□□□□ -0.09
CCM2LQ9NUG4 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCM2LQ9NUG4 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CCM2LQ9NUG4 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
CCM2LQ9NUG4 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
CCM2LQ9NUG4 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.52□□□□□ -0.09
CCM2LQ9NUG4 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCM2LQ9NUG4 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCM2LQ9NUG4 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms