Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 LILRP1-201ENST00000444199 1370 ntBASIC14.4□□□□□ -0.1
NEUROD4Q9HD90 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NEUROD4Q9HD90 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NEUROD4Q9HD90 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NEUROD4Q9HD90 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
NEUROD4Q9HD90 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NEUROD4Q9HD90 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NEUROD4Q9HD90 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.4□□□□□ -0.1
NEUROD4Q9HD90 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.4□□□□□ -0.1
NEUROD4Q9HD90 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.4□□□□□ -0.1
NEUROD4Q9HD90 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NEUROD4Q9HD90 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.4□□□□□ -0.1
NEUROD4Q9HD90 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.4□□□□□ -0.1
NEUROD4Q9HD90 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NEUROD4Q9HD90 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.4□□□□□ -0.1
NEUROD4Q9HD90 RARRES2P5-201ENST00000564013 466 ntBASIC14.4□□□□□ -0.1
NEUROD4Q9HD90 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.4□□□□□ -0.1
NEUROD4Q9HD90 AC008738.7-201ENST00000609744 511 ntBASIC14.4□□□□□ -0.1
NEUROD4Q9HD90 AL008721.1-201ENST00000609964 604 ntBASIC14.4□□□□□ -0.1
NEUROD4Q9HD90 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NEUROD4Q9HD90 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NEUROD4Q9HD90 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
NEUROD4Q9HD90 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.4□□□□□ -0.1
NEUROD4Q9HD90 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.4□□□□□ -0.1
NEUROD4Q9HD90 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
NEUROD4Q9HD90 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NEUROD4Q9HD90 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
NEUROD4Q9HD90 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NEUROD4Q9HD90 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NEUROD4Q9HD90 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
NEUROD4Q9HD90 AL360270.3-201ENST00000609118 1348 ntBASIC14.4□□□□□ -0.1
NEUROD4Q9HD90 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
NEUROD4Q9HD90 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.11
NEUROD4Q9HD90 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 LINC00552-201ENST00000625151 2579 ntBASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 AC067750.1-201ENST00000608826 6545 ntBASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 AL645937.2-201ENST00000396808 931 ntBASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 MEP1AP4-201ENST00000423244 1087 ntBASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 UGT1A2P-201ENST00000454886 866 ntBASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 SPDYE18-201ENST00000510091 1050 ntBASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 CR383656.12-201ENST00000549567 513 ntBASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 AL359881.2-201ENST00000602973 570 ntBASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 AC005786.4-201ENST00000623369 682 ntBASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 AL359258.3-201ENST00000622910 2331 ntBASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 AL009178.2-201ENST00000597278 2719 ntBASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
NEUROD4Q9HD90 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 CLK3P2-201ENST00000427566 1453 ntBASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms