Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 KRT223P-202ENST00000449164 1292 ntBASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 AC114812.1-204ENST00000449669 728 ntBASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 CTBP2P5-201ENST00000454986 1264 ntBASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 AC007551.1-201ENST00000457394 519 ntBASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 FTH1P14-201ENST00000482930 551 ntBASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 SAMD11P1-201ENST00000571429 661 ntBASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 AC097376.2-205ENST00000610159 5334 ntBASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 AC087481.3-201ENST00000602886 1894 ntBASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 RNU1-114P-201ENST00000365297 166 ntBASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 KLF2P2-201ENST00000416807 1039 ntBASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 MIR6775-201ENST00000617557 69 ntBASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 COX11-210ENST00000639671 696 ntBASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 AC007787.1-201ENST00000588095 1583 ntBASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 LRRC59-203ENST00000576448 1531 ntBASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SSBP3Q9BWW4 WARS-232ENST00000556645 2508 ntTSL 5 BASIC12.71□□□□□ -0.37
SSBP3Q9BWW4 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP3Q9BWW4 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP3Q9BWW4 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP3Q9BWW4 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC12.71□□□□□ -0.37
SSBP3Q9BWW4 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP3Q9BWW4 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP3Q9BWW4 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC12.71□□□□□ -0.37
SSBP3Q9BWW4 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP3Q9BWW4 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
SSBP3Q9BWW4 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP3Q9BWW4 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP3Q9BWW4 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP3Q9BWW4 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
SSBP3Q9BWW4 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP3Q9BWW4 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC12.71□□□□□ -0.37
SSBP3Q9BWW4 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP3Q9BWW4 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC12.71□□□□□ -0.37
SSBP3Q9BWW4 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms