Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 AC064862.6-203ENST00000605139 691 ntTSL 5 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC4.42□□□□□ -1.7
HMCN1Q96RW7 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC4.42□□□□□ -1.7
HMCN1Q96RW7 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 AC008993.3-201ENST00000633603 631 ntTSL 5 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 ABALON-201ENST00000629058 1903 ntBASIC4.42□□□□□ -1.7
HMCN1Q96RW7 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 OR2A5-201ENST00000408906 1013 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 MLN-202ENST00000430124 566 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 AL121983.2-204ENST00000430592 448 ntTSL 3 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 XBP1P1-201ENST00000436573 652 ntBASIC4.42□□□□□ -1.7
HMCN1Q96RW7 AC131097.4-201ENST00000442867 571 ntTSL 4 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 TCEA3-204ENST00000461794 713 ntTSL 3 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 STEAP2-AS1-202ENST00000478318 627 ntTSL 3 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 AC027228.1-201ENST00000560094 325 ntTSL 3 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 AC239859.5-201ENST00000614100 1232 ntBASIC4.42□□□□□ -1.7
HMCN1Q96RW7 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 AC019109.1-201ENST00000401725 1874 ntBASIC4.42□□□□□ -1.7
HMCN1Q96RW7 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 FRG1-201ENST00000226798 1074 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 IGHV1OR15-9-201ENST00000338912 353 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 NRSN1-201ENST00000378475 800 ntTSL 3 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 MIR602-201ENST00000384960 98 ntBASIC4.42□□□□□ -1.7
HMCN1Q96RW7 KRT18P36-201ENST00000411618 1276 ntBASIC4.42□□□□□ -1.7
HMCN1Q96RW7 FTH1P18-201ENST00000412071 549 ntBASIC4.42□□□□□ -1.7
HMCN1Q96RW7 SPATA24-204ENST00000507779 606 ntTSL 5 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 TMEM241-208ENST00000542162 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 PXN-AS1-205ENST00000542314 707 ntTSL 2 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 AC027682.3-201ENST00000564717 207 ntTSL 5 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 DNM1P50-201ENST00000565767 508 ntBASIC4.42□□□□□ -1.7
HMCN1Q96RW7 RN7SL5P-201ENST00000581458 321 ntBASIC4.42□□□□□ -1.7
HMCN1Q96RW7 MIR4689-201ENST00000582517 70 ntBASIC4.42□□□□□ -1.7
HMCN1Q96RW7 AC063977.2-201ENST00000601996 421 ntBASIC4.42□□□□□ -1.7
HMCN1Q96RW7 PDZRN3-AS1-203ENST00000608743 780 ntTSL 5 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 C5orf60-208ENST00000625191 1208 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 TEAD1-207ENST00000638666 1281 ntAPPRIS P2 TSL 2 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 TUBA3GP-201ENST00000410028 1325 ntBASIC4.41□□□□□ -1.7
HMCN1Q96RW7 CLUHP3-207ENST00000563678 1303 ntBASIC4.41□□□□□ -1.7
HMCN1Q96RW7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 AC011477.6-201ENST00000604980 1927 ntBASIC4.41□□□□□ -1.7
HMCN1Q96RW7 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 AL445070.1-201ENST00000414631 714 ntTSL 3 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 PSAT1P2-201ENST00000426107 972 ntBASIC4.41□□□□□ -1.7
HMCN1Q96RW7 AL161937.2-202ENST00000435301 733 ntTSL 3 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 ACTG1P23-201ENST00000437653 1074 ntBASIC4.41□□□□□ -1.7
HMCN1Q96RW7 AC009901.2-201ENST00000521595 240 ntBASIC4.41□□□□□ -1.7
HMCN1Q96RW7 AP002490.2-201ENST00000524791 560 ntBASIC4.41□□□□□ -1.7
HMCN1Q96RW7 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 AL355075.5-201ENST00000553568 890 ntBASIC4.41□□□□□ -1.7
HMCN1Q96RW7 AC109631.1-201ENST00000559695 781 ntBASIC4.41□□□□□ -1.7
HMCN1Q96RW7 SNHG21-205ENST00000561107 790 ntTSL 2 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 MPHOSPH6-207ENST00000569021 392 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 snoZ6.3-201ENST00000583496 76 ntBASIC4.41□□□□□ -1.7
HMCN1Q96RW7 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms