Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
AP1S3Q96PC3 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
AP1S3Q96PC3 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
AP1S3Q96PC3 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
AP1S3Q96PC3 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC11.58□□□□□ -0.56
AP1S3Q96PC3 AF186996.4-201ENST00000467186 377 ntBASIC11.58□□□□□ -0.56
AP1S3Q96PC3 RNPS1P1-201ENST00000507437 918 ntBASIC11.58□□□□□ -0.56
AP1S3Q96PC3 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC11.58□□□□□ -0.56
AP1S3Q96PC3 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
AP1S3Q96PC3 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC11.58□□□□□ -0.56
AP1S3Q96PC3 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC11.58□□□□□ -0.56
AP1S3Q96PC3 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC11.58□□□□□ -0.56
AP1S3Q96PC3 SETD7-201ENST00000274031 7365 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
AP1S3Q96PC3 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC11.58□□□□□ -0.56
AP1S3Q96PC3 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC11.58□□□□□ -0.56
AP1S3Q96PC3 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
AP1S3Q96PC3 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC11.58□□□□□ -0.56
AP1S3Q96PC3 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
AP1S3Q96PC3 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
AP1S3Q96PC3 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
AP1S3Q96PC3 OTOF-203ENST00000339598 4756 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
AP1S3Q96PC3 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
AP1S3Q96PC3 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
AP1S3Q96PC3 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
AP1S3Q96PC3 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
AP1S3Q96PC3 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
AP1S3Q96PC3 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
AP1S3Q96PC3 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
AP1S3Q96PC3 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
AP1S3Q96PC3 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 AC011481.3-201ENST00000623895 5594 ntBASIC11.57□□□□□ -0.56
AP1S3Q96PC3 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 NDST1-201ENST00000261797 8030 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 SPG11-201ENST00000261866 7774 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 UPK3BP1-201ENST00000428678 509 ntBASIC11.57□□□□□ -0.56
AP1S3Q96PC3 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 AC108751.1-201ENST00000490852 363 ntBASIC11.57□□□□□ -0.56
AP1S3Q96PC3 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 FLII-221ENST00000578558 2377 ntTSL 5 BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 CBL-201ENST00000264033 11231 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 AL109976.1-201ENST00000621919 5678 ntBASIC11.57□□□□□ -0.56
AP1S3Q96PC3 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 AMT-204ENST00000427987 1646 ntTSL 5 BASIC11.57□□□□□ -0.56
AP1S3Q96PC3 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
AP1S3Q96PC3 HAL-202ENST00000538703 2637 ntTSL 2 BASIC11.56□□□□□ -0.56
AP1S3Q96PC3 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms