Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.27
CPEB3Q8NE35 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.33□□□□□ -0.27
CPEB3Q8NE35 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
CPEB3Q8NE35 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CPEB3Q8NE35 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
CPEB3Q8NE35 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
CPEB3Q8NE35 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CPEB3Q8NE35 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CPEB3Q8NE35 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CPEB3Q8NE35 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.33□□□□□ -0.28
CPEB3Q8NE35 ACE3P-201ENST00000423435 1973 ntBASIC13.33□□□□□ -0.28
CPEB3Q8NE35 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.33□□□□□ -0.28
CPEB3Q8NE35 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CPEB3Q8NE35 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.33□□□□□ -0.28
CPEB3Q8NE35 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CPEB3Q8NE35 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CPEB3Q8NE35 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CPEB3Q8NE35 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
CPEB3Q8NE35 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CPEB3Q8NE35 AL035633.1-201ENST00000406139 838 ntBASIC13.33□□□□□ -0.28
CPEB3Q8NE35 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.33□□□□□ -0.28
CPEB3Q8NE35 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.33□□□□□ -0.28
CPEB3Q8NE35 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.33□□□□□ -0.28
CPEB3Q8NE35 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.33□□□□□ -0.28
CPEB3Q8NE35 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.33□□□□□ -0.28
CPEB3Q8NE35 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.33□□□□□ -0.28
CPEB3Q8NE35 AC011495.1-201ENST00000498085 584 ntBASIC13.33□□□□□ -0.28
CPEB3Q8NE35 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CPEB3Q8NE35 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CPEB3Q8NE35 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
CPEB3Q8NE35 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
CPEB3Q8NE35 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CPEB3Q8NE35 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.33□□□□□ -0.28
CPEB3Q8NE35 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.33□□□□□ -0.28
CPEB3Q8NE35 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.33□□□□□ -0.28
CPEB3Q8NE35 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.33□□□□□ -0.28
CPEB3Q8NE35 BX539320.1-201ENST00000623759 877 ntBASIC13.33□□□□□ -0.28
CPEB3Q8NE35 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.33□□□□□ -0.28
CPEB3Q8NE35 AC025048.6-201ENST00000634326 1161 ntBASIC13.33□□□□□ -0.28
CPEB3Q8NE35 AL033527.5-201ENST00000641382 801 ntBASIC13.33□□□□□ -0.28
CPEB3Q8NE35 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CPEB3Q8NE35 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CPEB3Q8NE35 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CPEB3Q8NE35 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CPEB3Q8NE35 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.33□□□□□ -0.28
CPEB3Q8NE35 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.33□□□□□ -0.28
CPEB3Q8NE35 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CPEB3Q8NE35 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CPEB3Q8NE35 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CPEB3Q8NE35 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CPEB3Q8NE35 REXO1L5P-201ENST00000622260 2098 ntBASIC13.33□□□□□ -0.28
CPEB3Q8NE35 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CPEB3Q8NE35 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CPEB3Q8NE35 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CPEB3Q8NE35 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CPEB3Q8NE35 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CPEB3Q8NE35 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CPEB3Q8NE35 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CPEB3Q8NE35 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CPEB3Q8NE35 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CPEB3Q8NE35 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CPEB3Q8NE35 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CPEB3Q8NE35 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 ENPP7P5-201ENST00000541031 1031 ntBASIC13.32□□□□□ -0.28
CPEB3Q8NE35 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 CU634019.7-201ENST00000624153 1185 ntBASIC13.32□□□□□ -0.28
CPEB3Q8NE35 AC005252.2-201ENST00000624630 1141 ntBASIC13.32□□□□□ -0.28
CPEB3Q8NE35 FP236241.2-201ENST00000624906 1185 ntBASIC13.32□□□□□ -0.28
CPEB3Q8NE35 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms