Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CSMD2Q7Z408 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CSMD2Q7Z408 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CSMD2Q7Z408 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CSMD2Q7Z408 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CSMD2Q7Z408 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CSMD2Q7Z408 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CSMD2Q7Z408 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CSMD2Q7Z408 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC12.42□□□□□ -0.42
CSMD2Q7Z408 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC12.42□□□□□ -0.42
CSMD2Q7Z408 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC12.42□□□□□ -0.42
CSMD2Q7Z408 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CSMD2Q7Z408 RPL35P9-201ENST00000446059 350 ntBASIC12.42□□□□□ -0.42
CSMD2Q7Z408 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC12.42□□□□□ -0.42
CSMD2Q7Z408 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CSMD2Q7Z408 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CSMD2Q7Z408 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CSMD2Q7Z408 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CSMD2Q7Z408 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CSMD2Q7Z408 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC12.42□□□□□ -0.42
CSMD2Q7Z408 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.42□□□□□ -0.42
CSMD2Q7Z408 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CSMD2Q7Z408 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CSMD2Q7Z408 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CSMD2Q7Z408 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CSMD2Q7Z408 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CSMD2Q7Z408 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CSMD2Q7Z408 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.42□□□□□ -0.42
CSMD2Q7Z408 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC12.42□□□□□ -0.42
CSMD2Q7Z408 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC12.42□□□□□ -0.42
CSMD2Q7Z408 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC12.42□□□□□ -0.42
CSMD2Q7Z408 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.42□□□□□ -0.42
CSMD2Q7Z408 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC12.42□□□□□ -0.42
CSMD2Q7Z408 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC12.42□□□□□ -0.42
CSMD2Q7Z408 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC12.42□□□□□ -0.42
CSMD2Q7Z408 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC12.42□□□□□ -0.42
CSMD2Q7Z408 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CSMD2Q7Z408 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CSMD2Q7Z408 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.42□□□□□ -0.42
CSMD2Q7Z408 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.42□□□□□ -0.42
CSMD2Q7Z408 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CSMD2Q7Z408 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CSMD2Q7Z408 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CSMD2Q7Z408 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CSMD2Q7Z408 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CSMD2Q7Z408 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC12.41□□□□□ -0.42
CSMD2Q7Z408 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CSMD2Q7Z408 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC12.41□□□□□ -0.42
CSMD2Q7Z408 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
CSMD2Q7Z408 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC12.41□□□□□ -0.42
CSMD2Q7Z408 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC12.41□□□□□ -0.42
CSMD2Q7Z408 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CSMD2Q7Z408 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC12.41□□□□□ -0.42
CSMD2Q7Z408 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CSMD2Q7Z408 RPL14-203ENST00000416518 812 ntTSL 3 BASIC12.41□□□□□ -0.42
CSMD2Q7Z408 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC12.41□□□□□ -0.42
CSMD2Q7Z408 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC12.41□□□□□ -0.42
CSMD2Q7Z408 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC12.41□□□□□ -0.42
CSMD2Q7Z408 CTBP2P6-201ENST00000526402 1229 ntBASIC12.41□□□□□ -0.42
CSMD2Q7Z408 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.41□□□□□ -0.42
CSMD2Q7Z408 AC142086.5-202ENST00000562500 217 ntBASIC12.41□□□□□ -0.42
CSMD2Q7Z408 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
CSMD2Q7Z408 HELLS-212ENST00000630929 400 ntTSL 5 BASIC12.41□□□□□ -0.42
CSMD2Q7Z408 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC12.41□□□□□ -0.42
CSMD2Q7Z408 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CSMD2Q7Z408 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CSMD2Q7Z408 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC12.41□□□□□ -0.42
CSMD2Q7Z408 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CSMD2Q7Z408 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CSMD2Q7Z408 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
CSMD2Q7Z408 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC12.41□□□□□ -0.42
CSMD2Q7Z408 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CSMD2Q7Z408 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
CSMD2Q7Z408 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
CSMD2Q7Z408 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CSMD2Q7Z408 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC12.41□□□□□ -0.42
CSMD2Q7Z408 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC12.41□□□□□ -0.42
CSMD2Q7Z408 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
CSMD2Q7Z408 CSNK1G2P1-201ENST00000442675 955 ntBASIC12.41□□□□□ -0.42
CSMD2Q7Z408 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC12.41□□□□□ -0.42
CSMD2Q7Z408 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC12.41□□□□□ -0.42
CSMD2Q7Z408 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CSMD2Q7Z408 AC138701.2-201ENST00000553634 226 ntBASIC12.41□□□□□ -0.42
CSMD2Q7Z408 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CSMD2Q7Z408 MIR3188-201ENST00000583494 85 ntBASIC12.41□□□□□ -0.42
CSMD2Q7Z408 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC12.41□□□□□ -0.42
CSMD2Q7Z408 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC12.41□□□□□ -0.42
CSMD2Q7Z408 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC12.41□□□□□ -0.42
CSMD2Q7Z408 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CSMD2Q7Z408 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CSMD2Q7Z408 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.41□□□□□ -0.42
CSMD2Q7Z408 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
CSMD2Q7Z408 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
CSMD2Q7Z408 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CSMD2Q7Z408 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CSMD2Q7Z408 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.41□□□□□ -0.42
CSMD2Q7Z408 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CSMD2Q7Z408 TMBIM7P-202ENST00000641474 1516 ntBASIC12.41□□□□□ -0.42
CSMD2Q7Z408 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC12.41□□□□□ -0.42
CSMD2Q7Z408 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 280.4 ms