Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NUP54Q7Z3B4 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
NUP54Q7Z3B4 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NUP54Q7Z3B4 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NUP54Q7Z3B4 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NUP54Q7Z3B4 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
NUP54Q7Z3B4 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
NUP54Q7Z3B4 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NUP54Q7Z3B4 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NUP54Q7Z3B4 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.09□□□□□ -0.15
NUP54Q7Z3B4 AC023024.2-201ENST00000623561 1993 ntBASIC14.09□□□□□ -0.15
NUP54Q7Z3B4 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NUP54Q7Z3B4 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NUP54Q7Z3B4 TCAF2P1-201ENST00000291129 2421 ntBASIC14.09□□□□□ -0.15
NUP54Q7Z3B4 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
NUP54Q7Z3B4 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.09□□□□□ -0.15
NUP54Q7Z3B4 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NUP54Q7Z3B4 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.08□□□□□ -0.15
NUP54Q7Z3B4 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NUP54Q7Z3B4 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
NUP54Q7Z3B4 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.08□□□□□ -0.16
NUP54Q7Z3B4 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.08□□□□□ -0.16
NUP54Q7Z3B4 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
NUP54Q7Z3B4 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.08□□□□□ -0.16
NUP54Q7Z3B4 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NUP54Q7Z3B4 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NUP54Q7Z3B4 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NUP54Q7Z3B4 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NUP54Q7Z3B4 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NUP54Q7Z3B4 ZBED1P1-201ENST00000502364 1930 ntBASIC14.08□□□□□ -0.16
NUP54Q7Z3B4 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.08□□□□□ -0.16
NUP54Q7Z3B4 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
NUP54Q7Z3B4 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NUP54Q7Z3B4 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NUP54Q7Z3B4 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.08□□□□□ -0.16
NUP54Q7Z3B4 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.08□□□□□ -0.16
NUP54Q7Z3B4 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NUP54Q7Z3B4 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.08□□□□□ -0.16
NUP54Q7Z3B4 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.08□□□□□ -0.16
NUP54Q7Z3B4 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NUP54Q7Z3B4 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.08□□□□□ -0.16
NUP54Q7Z3B4 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NUP54Q7Z3B4 AC022137.2-201ENST00000503482 481 ntBASIC14.08□□□□□ -0.16
NUP54Q7Z3B4 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NUP54Q7Z3B4 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
NUP54Q7Z3B4 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.08□□□□□ -0.16
NUP54Q7Z3B4 MIR5189-201ENST00000577370 114 ntBASIC14.08□□□□□ -0.16
NUP54Q7Z3B4 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
NUP54Q7Z3B4 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.08□□□□□ -0.16
NUP54Q7Z3B4 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.08□□□□□ -0.16
NUP54Q7Z3B4 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NUP54Q7Z3B4 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NUP54Q7Z3B4 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
NUP54Q7Z3B4 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NUP54Q7Z3B4 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
NUP54Q7Z3B4 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NUP54Q7Z3B4 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NUP54Q7Z3B4 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NUP54Q7Z3B4 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
NUP54Q7Z3B4 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NUP54Q7Z3B4 AL158070.2-201ENST00000623713 1621 ntBASIC14.08□□□□□ -0.16
NUP54Q7Z3B4 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NUP54Q7Z3B4 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NUP54Q7Z3B4 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NUP54Q7Z3B4 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NUP54Q7Z3B4 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.07□□□□□ -0.16
NUP54Q7Z3B4 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NUP54Q7Z3B4 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NUP54Q7Z3B4 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
NUP54Q7Z3B4 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
NUP54Q7Z3B4 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NUP54Q7Z3B4 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.07□□□□□ -0.16
NUP54Q7Z3B4 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NUP54Q7Z3B4 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.07□□□□□ -0.16
NUP54Q7Z3B4 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.07□□□□□ -0.16
NUP54Q7Z3B4 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NUP54Q7Z3B4 AGAP7P-201ENST00000582299 2062 ntBASIC14.07□□□□□ -0.16
NUP54Q7Z3B4 AGAP14-201ENST00000624701 2060 ntBASIC14.07□□□□□ -0.16
NUP54Q7Z3B4 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NUP54Q7Z3B4 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
NUP54Q7Z3B4 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NUP54Q7Z3B4 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.07□□□□□ -0.16
NUP54Q7Z3B4 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.07□□□□□ -0.16
NUP54Q7Z3B4 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
NUP54Q7Z3B4 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NUP54Q7Z3B4 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NUP54Q7Z3B4 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NUP54Q7Z3B4 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
NUP54Q7Z3B4 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.07□□□□□ -0.16
NUP54Q7Z3B4 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
NUP54Q7Z3B4 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.07□□□□□ -0.16
NUP54Q7Z3B4 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.07□□□□□ -0.16
NUP54Q7Z3B4 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.07□□□□□ -0.16
NUP54Q7Z3B4 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NUP54Q7Z3B4 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NUP54Q7Z3B4 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
NUP54Q7Z3B4 AC068587.3-201ENST00000526613 355 ntBASIC14.07□□□□□ -0.16
NUP54Q7Z3B4 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.07□□□□□ -0.16
NUP54Q7Z3B4 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NUP54Q7Z3B4 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms